FFCP PHASE1:Hg19::chr4:72897735..72897749,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10886 | |EntrezGene=10886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4525 | |HGNC=4525 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_uc010iig.1_5end | |association_with_transcript=214bp_to_uc010iig.1_5end | ||
|cluster_id=chr4:72897735..72897749,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_3_at_NPFFR2_5end | |description=CAGE_peak_3_at_NPFFR2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.93e-18;5!CL:0000306;6.87e-07;4!CL:0002222;6.87e-07;4!CL:0002224;6.87e-07;4 | |ontology_enrichment_celltype_v019=CL:0002537;1.93e-18;5!CL:0000306;6.87e-07;4!CL:0002222;6.87e-07;4!CL:0002224;6.87e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.48e-18,5;CL:0000306,6.87e-07,4;CL:0002222,6.87e-07,4;CL:0002224,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.10e-23;1!UBERON:0007297;2.90e-12;2 | |ontology_enrichment_development_v019=UBERON:0005754;4.10e-23;1!UBERON:0007297;2.90e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.87e-23;1!DOID:4549;1.87e-23;1!DOID:5861;1.87e-23;1!DOID:6496;1.87e-23;1 | |ontology_enrichment_disease_v019=DOID:3371;1.87e-23;1!DOID:4549;1.87e-23;1!DOID:5861;1.87e-23;1!DOID:6496;1.87e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.10e-23,1;DOID:4549,2.10e-23,1;DOID:5861,2.10e-23,1;DOID:6496,2.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.58e-17!22;UBERON:0001950!1.24e-16!20;UBERON:0000956!9.60e-15!25;UBERON:0000203!9.60e-15!25;UBERON:0001869!4.80e-14!32;UBERON:0002020!4.46e-13!34;UBERON:0003528!4.46e-13!34;UBERON:0001893!5.40e-13!34;UBERON:0002791!6.44e-12!33;UBERON:0007023!8.01e-12!115;UBERON:0001049!3.10e-10!57;UBERON:0005068!3.10e-10!57;UBERON:0006241!3.10e-10!57;UBERON:0007135!3.10e-10!57;UBERON:0002780!4.01e-10!41;UBERON:0001890!4.01e-10!41;UBERON:0006240!4.01e-10!41;UBERON:0003080!8.60e-10!42;UBERON:0002616!1.01e-09!59;UBERON:0002346!1.79e-09!90;UBERON:0003056!2.04e-09!61;UBERON:0000064!2.65e-09!219;UBERON:0003075!3.62e-09!86;UBERON:0007284!3.62e-09!86;UBERON:0001871!3.82e-09!7;UBERON:0000305!1.58e-08!7;UBERON:0000955!2.06e-08!69;UBERON:0006238!2.06e-08!69;UBERON:0000200!4.35e-08!6;UBERON:0000924!5.10e-08!173;UBERON:0006601!5.10e-08!173;UBERON:0000153!5.63e-08!129;UBERON:0007811!5.63e-08!129;UBERON:0000073!9.47e-08!94;UBERON:0001016!9.47e-08!94;UBERON:0004121!1.04e-07!169;UBERON:0004871!2.15e-07!8;UBERON:0005631!2.31e-07!14;UBERON:0000158!2.31e-07!14;UBERON:0001872!3.18e-07!5;UBERON:0001017!4.24e-07!82 | |ontology_enrichment_uberon=UBERON:0002619!3.58e-17!22;UBERON:0001950!1.24e-16!20;UBERON:0000956!9.60e-15!25;UBERON:0000203!9.60e-15!25;UBERON:0001869!4.80e-14!32;UBERON:0002020!4.46e-13!34;UBERON:0003528!4.46e-13!34;UBERON:0001893!5.40e-13!34;UBERON:0002791!6.44e-12!33;UBERON:0007023!8.01e-12!115;UBERON:0001049!3.10e-10!57;UBERON:0005068!3.10e-10!57;UBERON:0006241!3.10e-10!57;UBERON:0007135!3.10e-10!57;UBERON:0002780!4.01e-10!41;UBERON:0001890!4.01e-10!41;UBERON:0006240!4.01e-10!41;UBERON:0003080!8.60e-10!42;UBERON:0002616!1.01e-09!59;UBERON:0002346!1.79e-09!90;UBERON:0003056!2.04e-09!61;UBERON:0000064!2.65e-09!219;UBERON:0003075!3.62e-09!86;UBERON:0007284!3.62e-09!86;UBERON:0001871!3.82e-09!7;UBERON:0000305!1.58e-08!7;UBERON:0000955!2.06e-08!69;UBERON:0006238!2.06e-08!69;UBERON:0000200!4.35e-08!6;UBERON:0000924!5.10e-08!173;UBERON:0006601!5.10e-08!173;UBERON:0000153!5.63e-08!129;UBERON:0007811!5.63e-08!129;UBERON:0000073!9.47e-08!94;UBERON:0001016!9.47e-08!94;UBERON:0004121!1.04e-07!169;UBERON:0004871!2.15e-07!8;UBERON:0005631!2.31e-07!14;UBERON:0000158!2.31e-07!14;UBERON:0001872!3.18e-07!5;UBERON:0001017!4.24e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.10e-23;1!UBERON:0006868;4.10e-23;1!UBERON:0000305;1.80e-13;7!UBERON:0002370;2.90e-12;2!UBERON:0005058;2.90e-12;2!UBERON:0009113;2.90e-12;2!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0002418;1.00e-08;3!UBERON:0004755;1.00e-08;3!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0010077;6.87e-07;4!UBERON:0005389;6.87e-07;4!UBERON:0000484;6.87e-07;4!UBERON:0000965;6.87e-07;4!UBERON:0001803;6.87e-07;4!UBERON:0005904;9.10e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000998;4.10e-23;1!UBERON:0006868;4.10e-23;1!UBERON:0000305;1.80e-13;7!UBERON:0002370;2.90e-12;2!UBERON:0005058;2.90e-12;2!UBERON:0009113;2.90e-12;2!UBERON:0005631;1.01e-09;10!UBERON:0000158;1.01e-09;10!UBERON:0002418;1.00e-08;3!UBERON:0004755;1.00e-08;3!UBERON:0006947;1.30e-08;3!UBERON:0004054;1.30e-08;3!UBERON:0010077;6.87e-07;4!UBERON:0005389;6.87e-07;4!UBERON:0000484;6.87e-07;4!UBERON:0000965;6.87e-07;4!UBERON:0001803;6.87e-07;4!UBERON:0005904;9.10e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.13e-23,1;UBERON:0006868,5.13e-23,1;UBERON:0000305,1.49e-13,7;UBERON:0004871,5.52e-12,8;UBERON:0002418,1.04e-08,3;UBERON:0004755,1.04e-08,3;UBERON:0006947,1.40e-08,3;UBERON:0004054,1.40e-08,3;UBERON:0005631,3.04e-07,14;UBERON:0000158,3.04e-07,14;UBERON:0010077,6.87e-07,4;UBERON:0005389,6.87e-07,4;UBERON:0000484,6.87e-07,4;UBERON:0002546,6.87e-07,4;UBERON:0000965,6.87e-07,4;UBERON:0001803,6.87e-07,4;UBERON:0003073,6.87e-07,4;UBERON:0005426,6.87e-07,4;UBERON:0005904,9.63e-07,4 | |||
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| ||
|short_description=p3@NPFFR2 | |short_description=p3@NPFFR2 | ||
}} | }} |
Latest revision as of 12:11, 18 September 2015
Short description: | p3@NPFFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NPFFR2_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 214bp_to_uc010iig.1_5end |
EntrezGene: | NPFFR2 |
HGNC: | 4525 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.48e-18 | 5 |
crystallin accumulating cell | 6.87e-07 | 4 |
vertebrate lens cell | 6.87e-07 | 4 |
lens epithelial cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.13e-23 | 1 |
seminal fluid secreting gland | 5.13e-23 | 1 |
amnion | 1.49e-13 | 7 |
somatic layer of lateral plate mesoderm | 5.52e-12 | 8 |
cartilage tissue | 1.04e-08 | 3 |
skeletal tissue | 1.04e-08 | 3 |
male genital duct | 1.40e-08 | 3 |
internal male genitalia | 1.40e-08 | 3 |
extraembryonic membrane | 3.04e-07 | 14 |
membranous layer | 3.04e-07 | 14 |
cuboidal epithelium | 6.87e-07 | 4 |
transparent eye structure | 6.87e-07 | 4 |
simple cuboidal epithelium | 6.87e-07 | 4 |
cranial placode | 6.87e-07 | 4 |
lens of camera-type eye | 6.87e-07 | 4 |
epithelium of lens | 6.87e-07 | 4 |
lens placode | 6.87e-07 | 4 |
lens vesicle | 6.87e-07 | 4 |
duct of male reproductive system | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.10e-23 | 1 |
extraosseous chondrosarcoma | 2.10e-23 | 1 |
myxoid chondrosarcoma | 2.10e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 2.10e-23 | 1 |