FFCP PHASE1:Hg19::chr5:67576385..67576394,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:67576385..67576394,+ to FFCP PHASE1:Hg19::chr5:67576385..67576394,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5295 | |EntrezGene=5295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8979 | |HGNC=8979 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHI0 | |UniProt=E5RHI0 | ||
|association_with_transcript=250bp_to_ENST00000522084_5end | |||
|cluster_id=chr5:67576385..67576394,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_25_at_PIK3R1_5end | |||
|id=chr5:67576385..67576394,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.32e-16!18;CL:0000789!2.32e-16!18;CL:0002420!2.32e-16!18;CL:0002419!2.32e-16!18;CL:0000790!2.32e-16!18;CL:0000084!7.92e-16!25;CL:0000827!7.92e-16!25;CL:0000738!7.37e-12!140;CL:0002087!2.78e-11!119;CL:0000624!4.59e-11!6;CL:0000838!1.29e-10!52;CL:0000542!2.74e-10!53;CL:0000051!2.74e-10!53;CL:0002031!4.12e-10!124;CL:0000625!6.83e-09!11;CL:0000037!6.97e-08!172;CL:0000566!6.97e-08!172;CL:0000988!8.89e-08!182;CL:0002032!5.65e-07!165;CL:0000837!5.65e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000624;6.39e-43;6!CL:0000791;4.66e-31;18!CL:0000789;4.66e-31;18!CL:0002419;4.66e-31;18!CL:0000084;4.22e-27;25!CL:0000898;1.56e-22;3!CL:0000815;7.17e-16;2!CL:0000792;7.17e-16;2!CL:0002677;7.17e-16;2!CL:0000895;2.05e-08;1!CL:0000542;6.37e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,8.96e-43,6;CL:0000791,6.03e-31,18;CL:0000789,6.03e-31,18;CL:0002420,6.03e-31,18;CL:0002419,6.03e-31,18;CL:0000790,6.03e-31,18;CL:0000084,4.96e-27,25;CL:0000827,4.96e-27,25;CL:0000898,1.96e-22,3;CL:0000815,6.94e-16,2;CL:0000792,6.94e-16,2;CL:0002677,6.94e-16,2;CL:0000838,3.85e-12,52;CL:0000542,7.01e-12,53;CL:0000051,7.01e-12,53;CL:0000810,2.64e-08,1;CL:0000895,2.64e-08,1;CL:0002436,2.64e-08,1;CL:0002427,2.64e-08,1;CL:0002428,2.64e-08,1;CL:0002429,2.64e-08,1;CL:0002433,2.64e-08,1;CL:0002431,2.64e-08,1;CL:0002432,2.64e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;4.66e-31;18!CL:0002427;2.05e-08;1!CL:0000051;6.37e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.71e-11!15;UBERON:0000179!4.71e-11!15;UBERON:0000463!4.71e-11!15;UBERON:0007023!2.05e-09!115;UBERON:0002193!1.40e-08!112;UBERON:0002390!3.67e-08!102;UBERON:0003061!3.67e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.05e-08;1!UBERON:0002171;2.05e-08;1!UBERON:0006518;2.05e-08;1!UBERON:0008949;2.05e-08;1!UBERON:0000101;2.05e-08;1!UBERON:0002167;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.02e-08,1;UBERON:0002171,2.29e-08,1;UBERON:0006518,2.29e-08,1;UBERON:0008949,2.29e-08,1;UBERON:0000101,2.29e-08,1;UBERON:0002167,2.29e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.37696839079683,1.17903228824749,3.08402248499264,1.00311897234407,2.60737813306872,1.89379122293893,1.94826728407911,0.668462741311041,3.53527088969805,3.1014745241707,4.06205795647523,0.640456598628376,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,1.63115219478266,1.60524496853828,1.04535523804977,1.0197840842781,1.14966148080576,1.71813722741315,5.56643322442906,0,1.30216690771284,0,0.301150238155546,0.76791966692651,3.74792179657038,0.710331756132051,0,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0.492339221844278,0,0,0,0,0.789147245095469,4.7896618469388,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0,0,0,1.03382309777839,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.12729431655633,0,0,0,0.202056159043763,0.358611026963382,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.575384784644301,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.37696839079683,1.17903228824749,3.08402248499264,1.00311897234407,2.60737813306872,1.89379122293893,1.94826728407911,0.668462741311041,3.53527088969805,3.1014745241707,4.06205795647523,0.640456598628376,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,1.63115219478266,1.60524496853828,1.04535523804977,1.0197840842781,1.14966148080576,1.71813722741315,5.56643322442906,0,1.30216690771284,0,0.301150238155546,0.76791966692651,3.74792179657038,0.710331756132051,0,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0.492339221844278,0,0,0,0,0.789147245095469,4.7896618469388,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0.196308467114945,0,0,0,1.03382309777839,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.12729431655633,0,0,0,0.202056159043763,0.358611026963382,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0.961705476909699 | ||
|short_description=p25@PIK3R1 | |||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p25@PIK3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_PIK3R1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 250bp_to_ENST00000522084_5end |
EntrezGene: | PIK3R1 |
HGNC: | 8979 |
UniProt: | E5RHI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 8.96e-43 | 6 |
mature alpha-beta T cell | 6.03e-31 | 18 |
alpha-beta T cell | 6.03e-31 | 18 |
immature T cell | 6.03e-31 | 18 |
mature T cell | 6.03e-31 | 18 |
immature alpha-beta T cell | 6.03e-31 | 18 |
T cell | 4.96e-27 | 25 |
pro-T cell | 4.96e-27 | 25 |
naive T cell | 1.96e-22 | 3 |
regulatory T cell | 6.94e-16 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.94e-16 | 2 |
naive regulatory T cell | 6.94e-16 | 2 |
lymphoid lineage restricted progenitor cell | 3.85e-12 | 52 |
lymphocyte | 7.01e-12 | 53 |
common lymphoid progenitor | 7.01e-12 | 53 |
CD4-positive, alpha-beta thymocyte | 2.64e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.64e-08 | 1 |
mature CD4 single-positive thymocyte | 2.64e-08 | 1 |
resting double-positive thymocyte | 2.64e-08 | 1 |
double-positive blast | 2.64e-08 | 1 |
CD69-positive double-positive thymocyte | 2.64e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.64e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.64e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.64e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.02e-08 | 1 |
lower lobe of right lung | 2.29e-08 | 1 |
right lung lobe | 2.29e-08 | 1 |
lower lobe of lung | 2.29e-08 | 1 |
lobe of lung | 2.29e-08 | 1 |
right lung | 2.29e-08 | 1 |