FFCP PHASE1:Hg19::chr3:47205499..47205530,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18420 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z317,F5H340,Q9BYW2 | |||
|association_with_transcript=-32bp_to_ENST00000451092,ENST00000543224,NM_014159,uc003cqs.2,uc003cqv.2_5end | |||
|cluster_id=chr3:47205499..47205530,- | |||
|description=CAGE_peak_3_at_SETD2_5end | |||
|id=chr3:47205499..47205530,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.15e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.39e-24!115;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0000924!3.01e-08!173;UBERON:0006601!3.01e-08!173;UBERON:0004121!3.17e-08!169;UBERON:0001017!9.33e-08!82;UBERON:0001049!3.38e-07!57;UBERON:0005068!3.38e-07!57;UBERON:0006241!3.38e-07!57;UBERON:0007135!3.38e-07!57;UBERON:0001007!3.76e-07!155;UBERON:0001555!3.76e-07!155;UBERON:0007026!3.76e-07!155;UBERON:0005743!5.41e-07!86;UBERON:0000955!5.79e-07!69;UBERON:0006238!5.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.36e-08;49!UBERON:0007023;1.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.50e-26,114;UBERON:0011216,1.34e-12,223;UBERON:0001016,1.30e-10,89;UBERON:0001049,9.69e-09,56;UBERON:0005068,9.69e-09,56;UBERON:0006241,9.69e-09,56;UBERON:0007135,9.69e-09,56;UBERON:0001017,1.26e-08,81;UBERON:0000955,2.37e-08,68;UBERON:0006238,2.37e-08,68;UBERON:0004121,3.18e-08,171;UBERON:0000924,3.18e-08,171;UBERON:0006601,3.18e-08,171;UBERON:0000073,5.19e-08,53;UBERON:0002616,5.19e-08,53;UBERON:0002780,7.31e-07,41;UBERON:0001890,7.31e-07,41;UBERON:0003080,7.31e-07,41;UBERON:0006240,7.31e-07,41 | |||
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| |||
|short_description=p3@SETD2 | |||
}} |
Latest revision as of 12:21, 18 September 2015
Short description: | p3@SETD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SETD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000451092, ENST00000543224, NM_014159, uc003cqs.2, uc003cqv.2_5end |
EntrezGene: | SETD2 |
HGNC: | 18420 |
UniProt: | F2Z317F5H340Q9BYW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.50e-26 | 114 |
organ system subdivision | 1.34e-12 | 223 |
nervous system | 1.30e-10 | 89 |
neural tube | 9.69e-09 | 56 |
neural rod | 9.69e-09 | 56 |
future spinal cord | 9.69e-09 | 56 |
neural keel | 9.69e-09 | 56 |
central nervous system | 1.26e-08 | 81 |
brain | 2.37e-08 | 68 |
future brain | 2.37e-08 | 68 |
ectoderm-derived structure | 3.18e-08 | 171 |
ectoderm | 3.18e-08 | 171 |
presumptive ectoderm | 3.18e-08 | 171 |
regional part of nervous system | 5.19e-08 | 53 |
regional part of brain | 5.19e-08 | 53 |
regional part of forebrain | 7.31e-07 | 41 |
forebrain | 7.31e-07 | 41 |
anterior neural tube | 7.31e-07 | 41 |
future forebrain | 7.31e-07 | 41 |