FFCP PHASE1:Hg19::chr16:89787680..89787746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9605 | |EntrezGene=9605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13526 | |HGNC=13526 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2B5 | |UniProt=Q9Y2B5 | ||
|association_with_transcript=-286bp_to_ENST00000389386,NM_004913,uc002fom.1_5end | |association_with_transcript=-286bp_to_ENST00000389386,NM_004913,uc002fom.1_5end | ||
|cluster_id=chr16:89787680..89787746,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_C16orf7_5end | |description=CAGE_peak_3_at_C16orf7_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.90e-14!180;CL:0000222!5.39e-13!119;CL:0000192!3.61e-11!42;CL:0000514!3.61e-11!42;CL:0000359!4.08e-10!32;CL:0000183!1.50e-09!59;CL:0000220!1.72e-09!246;CL:0000680!2.78e-09!57;CL:0000056!2.78e-09!57;CL:0000355!2.78e-09!57;CL:0002321!4.87e-09!248;CL:0000057!4.94e-09!75;CL:0000187!1.34e-08!54;CL:0000393!4.81e-07!60;CL:0000211!4.81e-07!60;CL:0002371!9.54e-07!591 | |ontology_enrichment_celltype=CL:0000055!5.90e-14!180;CL:0000222!5.39e-13!119;CL:0000192!3.61e-11!42;CL:0000514!3.61e-11!42;CL:0000359!4.08e-10!32;CL:0000183!1.50e-09!59;CL:0000220!1.72e-09!246;CL:0000680!2.78e-09!57;CL:0000056!2.78e-09!57;CL:0000355!2.78e-09!57;CL:0002321!4.87e-09!248;CL:0000057!4.94e-09!75;CL:0000187!1.34e-08!54;CL:0000393!4.81e-07!60;CL:0000211!4.81e-07!60;CL:0002371!9.54e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.79e-10;32!CL:0000192;5.47e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;5.79e-10;32!CL:0000192;5.47e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.72e-12,121;CL:0000359,1.06e-10,32;CL:0000192,2.94e-09,43;CL:0000514,2.94e-09,43;CL:0000680,1.37e-07,58;CL:0000056,1.37e-07,58;CL:0000355,1.37e-07,58;CL:0000057,1.94e-07,76;CL:0002321,6.75e-07,250;CL:0000187,9.01e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;5.47e-07;43 | |ontology_enrichment_development_v019=CL:0000514;5.47e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-09;33!UBERON:0004571;1.38e-09;33!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0007500;3.81e-07;56!UBERON:0001981;3.81e-07;56!UBERON:0004537;3.81e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-09;33!UBERON:0004571;1.38e-09;33!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0007500;3.81e-07;56!UBERON:0001981;3.81e-07;56!UBERON:0004537;3.81e-07;56 | ||
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| ||
|short_description=p3@C16orf7 | |short_description=p3@C16orf7 | ||
}} | }} |
Latest revision as of 12:33, 18 September 2015
Short description: | p3@C16orf7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C16orf7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -286bp_to_ENST00000389386, NM_004913, uc002fom.1_5end |
EntrezGene: | C16orf7 |
HGNC: | 13526 |
UniProt: | Q9Y2B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.72e-12 | 121 |
vascular associated smooth muscle cell | 1.06e-10 | 32 |
smooth muscle cell | 2.94e-09 | 43 |
smooth muscle myoblast | 2.94e-09 | 43 |
muscle precursor cell | 1.37e-07 | 58 |
myoblast | 1.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.37e-07 | 58 |
fibroblast | 1.94e-07 | 76 |
embryonic cell | 6.75e-07 | 250 |
muscle cell | 9.01e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 1.82e-13 | 42 |
arterial blood vessel | 1.82e-13 | 42 |
arterial system | 1.82e-13 | 42 |
splanchnic layer of lateral plate mesoderm | 3.51e-13 | 83 |
epithelial tube | 5.83e-13 | 117 |
systemic artery | 1.00e-11 | 33 |
systemic arterial system | 1.00e-11 | 33 |
epithelial tube open at both ends | 1.04e-11 | 59 |
blood vessel | 1.04e-11 | 59 |
blood vasculature | 1.04e-11 | 59 |
vascular cord | 1.04e-11 | 59 |
cardiovascular system | 6.85e-11 | 109 |
vessel | 1.31e-10 | 68 |
lateral plate mesoderm | 1.75e-10 | 203 |
circulatory system | 4.13e-10 | 112 |
vasculature | 2.90e-09 | 78 |
vascular system | 2.90e-09 | 78 |
mesoderm | 7.87e-09 | 315 |
mesoderm-derived structure | 7.87e-09 | 315 |
presumptive mesoderm | 7.87e-09 | 315 |
unilaminar epithelium | 9.71e-08 | 148 |
aorta | 1.65e-07 | 21 |
aortic system | 1.65e-07 | 21 |
trunk mesenchyme | 2.27e-07 | 122 |
epithelial vesicle | 2.30e-07 | 78 |
dense mesenchyme tissue | 4.41e-07 | 73 |
trunk | 5.90e-07 | 199 |
somite | 6.29e-07 | 71 |
presomitic mesoderm | 6.29e-07 | 71 |
presumptive segmental plate | 6.29e-07 | 71 |
dermomyotome | 6.29e-07 | 71 |
trunk paraxial mesoderm | 6.29e-07 | 71 |