FFCP PHASE1:Hg19::chr21:42602093..42602102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25825 | |EntrezGene=25825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=934 | |HGNC=934 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000466122_5end | |association_with_transcript=48bp_to_ENST00000466122_5end | ||
|cluster_id=chr21:42602093..42602102,+ | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_19_at_BACE2_5end | |description=CAGE_peak_19_at_BACE2_5end | ||
|id=chr21:42602093..42602102,+ | |id=chr21:42602093..42602102,+ | ||
|ontology_enrichment_celltype=CL:0000236!2.13e-68!14;CL:0000945!5.30e-55!24;CL:0000826!5.30e-55!24;CL:0000838!2.84e-28!52;CL:0000542!1.08e-27!53;CL:0000051!1.08e-27!53;CL:0002087!1.50e-12!119;CL:0002031!6.12e-12!124;CL:0000738!2.83e-10!140;CL:0000819!3.83e-09!1;CL:0002032!2.58e-08!165;CL:0000837!2.58e-08!165;CL:0000037!7.22e-08!172;CL:0000566!7.22e-08!172;CL:0000988!2.74e-07!182 | |ontology_enrichment_celltype=CL:0000236!2.13e-68!14;CL:0000945!5.30e-55!24;CL:0000826!5.30e-55!24;CL:0000838!2.84e-28!52;CL:0000542!1.08e-27!53;CL:0000051!1.08e-27!53;CL:0002087!1.50e-12!119;CL:0002031!6.12e-12!124;CL:0000738!2.83e-10!140;CL:0000819!3.83e-09!1;CL:0002032!2.58e-08!165;CL:0000837!2.58e-08!165;CL:0000037!7.22e-08!172;CL:0000566!7.22e-08!172;CL:0000988!2.74e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.85e-82;13!CL:0000945;5.90e-58;24!CL:0000542;2.08e-26;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.27e-76,14;CL:0000945,5.91e-58,24;CL:0000826,5.91e-58,24;CL:0000838,6.05e-34,52;CL:0000542,2.64e-33,53;CL:0000051,2.64e-33,53;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.08e-26;53 | |||
|ontology_enrichment_disease=DOID:0060073!3.83e-09!1;DOID:8675!3.83e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.44e-11!3;UBERON:0004854!2.44e-11!3;UBERON:0009034!2.44e-11!3;UBERON:0002095!2.44e-11!3;UBERON:0004782!2.44e-11!3;UBERON:0003281!2.44e-11!3;UBERON:0009664!2.44e-11!3;UBERON:0002296!2.44e-11!3;UBERON:0005602!2.44e-11!3;UBERON:0001179!2.44e-11!3;UBERON:0006293!2.44e-11!3;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p19@BACE2 | |short_description=p19@BACE2 | ||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p19@BACE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_BACE2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 48bp_to_ENST00000466122_5end |
EntrezGene: | BACE2 |
HGNC: | 934 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.27e-76 | 14 |
lymphocyte of B lineage | 5.91e-58 | 24 |
pro-B cell | 5.91e-58 | 24 |
lymphoid lineage restricted progenitor cell | 6.05e-34 | 52 |
lymphocyte | 2.64e-33 | 53 |
common lymphoid progenitor | 2.64e-33 | 53 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |