FFCP PHASE1:Hg19::chr4:74347539..74347542,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:74347539..74347542,+
|short_description=p2@AFM
|description=CAGE_peak_2_at_AFM_5end
|association_with_transcript=59bp_to_L35486_5end
|EntrezGene=173
|HGN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=173 | |EntrezGene=173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=316 | |HGNC=316 | ||
|TSSclassifier=strong | |||
|UniProt=P43652 | |UniProt=P43652 | ||
|association_with_transcript=59bp_to_L35486_5end | |||
|cluster_id=chr4:74347539..74347542,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_AFM_5end | |||
|id=chr4:74347539..74347542,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.76e-18!12;CL:0000417!1.76e-18!12;CL:0000668!1.76e-18!12;CL:0000414!1.76e-18!12;CL:0000412!1.76e-18!12;CL:0000182!1.76e-18!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.40e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.40e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.44e-17;1!UBERON:0004161;5.47e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.31e-20!19;UBERON:0006925!2.31e-20!19;UBERON:0008836!2.31e-20!19;UBERON:0005057!2.90e-18!26;UBERON:0008835!1.99e-17!22;UBERON:0003894!1.99e-17!22;UBERON:0009854!1.28e-16!23;UBERON:0007499!3.38e-15!25;UBERON:0009497!3.38e-15!25;UBERON:0000015!3.38e-15!25;UBERON:0002423!3.38e-15!25;UBERON:0006235!3.38e-15!25;UBERON:0004161!3.38e-15!25;UBERON:0009856!1.44e-14!26;UBERON:0002368!3.11e-13!35;UBERON:0003929!4.79e-12!54;UBERON:0002365!4.97e-12!31;UBERON:0002330!4.97e-12!31;UBERON:0005172!6.61e-12!55;UBERON:0005173!6.61e-12!55;UBERON:0002417!1.54e-10!61;UBERON:0000916!1.54e-10!61;UBERON:0000949!5.71e-10!45;UBERON:0003978!2.53e-09!3;UBERON:0009751!2.53e-09!3;UBERON:0000946!2.53e-09!3;UBERON:0002523!2.53e-09!3;UBERON:0005983!2.53e-09!3;UBERON:0002165!2.53e-09!3;UBERON:0002062!2.53e-09!3;UBERON:0007280!2.53e-09!3;UBERON:0002530!5.94e-09!59;UBERON:0000941!7.76e-08!1;UBERON:0004904!7.76e-08!1;UBERON:0002464!7.76e-08!1;UBERON:0001021!7.76e-08!1;UBERON:0001785!7.76e-08!1;UBERON:0002134!1.22e-07!1;UBERON:0005208!1.22e-07!1;UBERON:0005946!1.22e-07!1;UBERON:0005965!1.22e-07!1;UBERON:0002078!1.22e-07!1;UBERON:0002146!1.39e-07!1;UBERON:0005623!1.39e-07!1;UBERON:0005911!2.91e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.45e-22;19!UBERON:0006925;5.45e-22;19!UBERON:0000941;1.44e-17;1!UBERON:0001785;1.44e-17;1!UBERON:0002464;1.44e-17;1!UBERON:0004904;1.44e-17;1!UBERON:0001021;1.44e-17;1!UBERON:0002423;9.54e-17;25!UBERON:0002365;1.68e-13;31!UBERON:0002330;1.68e-13;31!UBERON:0002368;1.04e-11;33!UBERON:0003714;1.86e-09;2!UBERON:0005162;1.86e-09;2!UBERON:0000122;1.86e-09;2!UBERON:0000949;1.41e-08;43!UBERON:0005172;2.53e-08;52!UBERON:0005173;2.53e-08;52!UBERON:0002114;8.86e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.45e-22,19;UBERON:0006925,5.45e-22,19;UBERON:0008836,5.45e-22,19;UBERON:0008835,5.17e-19,22;UBERON:0003894,5.17e-19,22;UBERON:0009854,3.42e-18,23;UBERON:0000941,1.22e-17,1;UBERON:0001785,1.22e-17,1;UBERON:0002464,1.22e-17,1;UBERON:0004904,1.22e-17,1;UBERON:0001021,1.22e-17,1;UBERON:0003902,1.22e-17,1;UBERON:0005425,1.22e-17,1;UBERON:0007499,9.54e-17,25;UBERON:0009497,9.54e-17,25;UBERON:0000015,9.54e-17,25;UBERON:0002423,9.54e-17,25;UBERON:0006235,9.54e-17,25;UBERON:0004161,9.54e-17,25;UBERON:0009856,4.16e-16,26;UBERON:0002365,1.59e-13,31;UBERON:0002330,1.59e-13,31;UBERON:0002368,5.50e-12,35;UBERON:0005172,6.83e-11,54;UBERON:0005173,6.83e-11,54;UBERON:0002417,8.80e-10,60;UBERON:0000916,8.80e-10,60;UBERON:0003714,1.71e-09,2;UBERON:0005162,1.71e-09,2;UBERON:0000122,1.71e-09,2;UBERON:0000949,2.50e-09,45;UBERON:0003929,9.01e-08,54;UBERON:0002530,4.14e-07,59;UBERON:0002114,8.62e-07,2 | |||
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|short_description=p2@AFM | |||
}} | }} |
Latest revision as of 13:35, 18 September 2015
Short description: | p2@AFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AFM_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 59bp_to_L35486_5end |
EntrezGene: | AFM |
HGNC: | 316 |
UniProt: | P43652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.40e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.45e-22 | 19 |
digestive gland | 5.45e-22 | 19 |
liver bud | 5.45e-22 | 19 |
hepatic diverticulum | 5.17e-19 | 22 |
liver primordium | 5.17e-19 | 22 |
digestive tract diverticulum | 3.42e-18 | 23 |
cranial nerve II | 1.22e-17 | 1 |
cranial nerve | 1.22e-17 | 1 |
nerve trunk | 1.22e-17 | 1 |
nerve connecting eye with brain | 1.22e-17 | 1 |
nerve | 1.22e-17 | 1 |
retinal neural layer | 1.22e-17 | 1 |
presumptive neural retina | 1.22e-17 | 1 |
epithelial sac | 9.54e-17 | 25 |
epithelium of foregut-midgut junction | 9.54e-17 | 25 |
anatomical boundary | 9.54e-17 | 25 |
hepatobiliary system | 9.54e-17 | 25 |
foregut-midgut junction | 9.54e-17 | 25 |
septum transversum | 9.54e-17 | 25 |
sac | 4.16e-16 | 26 |
exocrine gland | 1.59e-13 | 31 |
exocrine system | 1.59e-13 | 31 |
endocrine gland | 5.50e-12 | 35 |
abdomen element | 6.83e-11 | 54 |
abdominal segment element | 6.83e-11 | 54 |
abdominal segment of trunk | 8.80e-10 | 60 |
abdomen | 8.80e-10 | 60 |
neural tissue | 1.71e-09 | 2 |
multi cell component structure | 1.71e-09 | 2 |
neuron projection bundle | 1.71e-09 | 2 |
endocrine system | 2.50e-09 | 45 |
gut epithelium | 9.01e-08 | 54 |
gland | 4.14e-07 | 59 |
duodenum | 8.62e-07 | 2 |