FFCP PHASE1:Hg19::chr3:48471830..48471839,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5364 | |EntrezGene=5364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9103 | |HGNC=9103 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-236bp_to_ENST00000448774_5end | |||
|cluster_id=chr3:48471830..48471839,- | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_27_at_PLXNB1_5end | |||
|id=chr3:48471830..48471839,- | |||
|ontology_enrichment_celltype=CL:0002623!2.23e-15!3;CL:0002327!3.29e-11!4;CL:0000622!2.10e-09!5;CL:0000154!6.68e-08!6;CL:0000240!2.48e-07!6;CL:0000311!2.48e-07!6;CL:0000079!2.48e-07!6;CL:0000237!2.48e-07!6;CL:0000036!2.48e-07!6;CL:0000357!2.48e-07!6;CL:0000114!2.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;8.98e-131;3!CL:0000622;3.49e-79;5!CL:0000154;2.83e-66;6!CL:0000150;9.75e-45;9!CL:0002251;5.71e-21;20!CL:0000151;1.90e-14;36!CL:0002076;3.44e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.98e-131,3;CL:0000622,3.49e-79,5;CL:0000154,2.83e-66,6;CL:0000150,9.75e-45,9;CL:0002251,5.71e-21,20;CL:0000151,2.91e-12,36;CL:0002076,1.07e-10,42;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000223;1.07e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!3.29e-11!4;UBERON:0005333!3.29e-11!4;UBERON:0008425!3.29e-11!4;UBERON:0005311!3.29e-11!4;UBERON:0003127!2.92e-10!2;UBERON:0001044!6.68e-08!6;UBERON:0003293!6.68e-08!6;UBERON:0003294!6.68e-08!6;UBERON:0010047!6.68e-08!6;UBERON:0000167!6.68e-08!6;UBERON:0003408!1.01e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.83e-66;6!UBERON:0003293;2.83e-66;6!UBERON:0003294;2.83e-66;6!UBERON:0010047;2.83e-66;6!UBERON:0003408;2.83e-66;6!UBERON:0000167;2.83e-66;6!UBERON:0001041;2.55e-29;14!UBERON:0000161;5.37e-22;19!UBERON:0000166;5.37e-22;19!UBERON:0000165;2.22e-15;28!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0004921;1.70e-11;33!UBERON:0007811;8.24e-08;52!UBERON:0000033;7.93e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.83e-66,6;UBERON:0003293,2.83e-66,6;UBERON:0003294,2.83e-66,6;UBERON:0010047,2.83e-66,6;UBERON:0000167,2.83e-66,6;UBERON:0003408,2.00e-40,10;UBERON:0000166,3.41e-19,22;UBERON:0000165,6.74e-15,29;UBERON:0000930,6.74e-15,29;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0000161,2.91e-12,36;UBERON:0001444,2.38e-09,49;UBERON:0000033,2.46e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0002553,9.44e-08,61;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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| ||
|short_description=p27@PLXNB1 | |||
}} | }} |
Latest revision as of 14:00, 18 September 2015
Short description: | p27@PLXNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PLXNB1_5end |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | -236bp_to_ENST00000448774_5end |
EntrezGene: | PLXNB1 |
HGNC: | 9103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.98e-131 | 3 |
acinar cell | 3.49e-79 | 5 |
protein secreting cell | 2.83e-66 | 6 |
glandular epithelial cell | 9.75e-45 | 9 |
epithelial cell of alimentary canal | 5.71e-21 | 20 |
secretory cell | 2.91e-12 | 36 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.83e-66 | 6 |
gland of oral region | 2.83e-66 | 6 |
gland of foregut | 2.83e-66 | 6 |
oral gland | 2.83e-66 | 6 |
oral cavity | 2.83e-66 | 6 |
gland of gut | 2.00e-40 | 10 |
oral opening | 3.41e-19 | 22 |
mouth | 6.74e-15 | 29 |
stomodeum | 6.74e-15 | 29 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
orifice | 2.91e-12 | 36 |
subdivision of head | 2.38e-09 | 49 |
head | 2.46e-08 | 56 |
gland | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |