FFCP PHASE1:Hg19::chr11:60609519..60609536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79080 | |EntrezGene=79080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28359 | |HGNC=28359 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6F5 | |UniProt=Q9H6F5 | ||
|association_with_transcript=-7bp_to_ENST00000227520_5end | |association_with_transcript=-7bp_to_ENST00000227520_5end | ||
|cluster_id=chr11:60609519..60609536,+ | |||
|coexpression_cluster_id=C3167 | |coexpression_cluster_id=C3167 | ||
|description=CAGE_peak_3_at_CCDC86_5end | |description=CAGE_peak_3_at_CCDC86_5end | ||
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|ontology_enrichment_celltype=CL:0000548!1.69e-18!679;CL:0000004!1.69e-18!679;CL:0000255!1.69e-18!679;CL:0000066!4.45e-18!254;CL:0000012!4.64e-18!682;CL:0002321!1.83e-17!248;CL:0000220!3.42e-17!246;CL:0000222!3.92e-16!119;CL:0000055!8.34e-15!180;CL:0000183!3.06e-13!59;CL:0000680!1.25e-11!57;CL:0000056!1.25e-11!57;CL:0000355!1.25e-11!57;CL:0000187!4.11e-11!54;CL:0000192!1.34e-09!42;CL:0000514!1.34e-09!42;CL:0000003!2.01e-09!722;CL:0000393!2.39e-09!60;CL:0000211!2.39e-09!60;CL:0000359!1.18e-08!32;CL:0000144!3.20e-07!625 | |ontology_enrichment_celltype=CL:0000548!1.69e-18!679;CL:0000004!1.69e-18!679;CL:0000255!1.69e-18!679;CL:0000066!4.45e-18!254;CL:0000012!4.64e-18!682;CL:0002321!1.83e-17!248;CL:0000220!3.42e-17!246;CL:0000222!3.92e-16!119;CL:0000055!8.34e-15!180;CL:0000183!3.06e-13!59;CL:0000680!1.25e-11!57;CL:0000056!1.25e-11!57;CL:0000355!1.25e-11!57;CL:0000187!4.11e-11!54;CL:0000192!1.34e-09!42;CL:0000514!1.34e-09!42;CL:0000003!2.01e-09!722;CL:0000393!2.39e-09!60;CL:0000211!2.39e-09!60;CL:0000359!1.18e-08!32;CL:0000144!3.20e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.50e-08;32!CL:0000192;1.11e-07;43!CL:0000187;7.40e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;1.50e-08;32!CL:0000192;1.11e-07;43!CL:0000187;7.40e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.35e-18,250;CL:0000066,6.77e-18,253;CL:0000222,1.07e-16,121;CL:0000680,6.40e-12,58;CL:0000056,6.40e-12,58;CL:0000355,6.40e-12,58;CL:0000187,2.12e-11,55;CL:0000192,7.02e-10,43;CL:0000514,7.02e-10,43;CL:0000393,1.29e-09,61;CL:0000211,1.29e-09,61;CL:0000359,1.14e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.11e-07;43!CL:0000355;7.92e-07;58 | |ontology_enrichment_development_v019=CL:0000514;1.11e-07;43!CL:0000355;7.92e-07;58 | ||
|ontology_enrichment_disease=DOID:14566!5.56e-12!239;DOID:162!4.29e-11!235;DOID:0050687!2.72e-09!143;DOID:305!4.95e-08!106 | |ontology_enrichment_disease=DOID:14566!5.56e-12!239;DOID:162!4.29e-11!235;DOID:0050687!2.72e-09!143;DOID:305!4.95e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,5.46e-12,239;DOID:162,4.23e-11,235;DOID:0050687,2.64e-09,143;DOID:305,4.85e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.97e-18!143;UBERON:0003104!7.22e-18!238;UBERON:0009142!7.22e-18!238;UBERON:0002100!4.64e-16!216;UBERON:0000490!2.64e-15!138;UBERON:0004290!9.31e-15!70;UBERON:0000914!1.41e-14!83;UBERON:0002329!1.41e-14!83;UBERON:0003077!1.41e-14!83;UBERON:0003059!1.41e-14!83;UBERON:0007282!1.41e-14!83;UBERON:0009618!1.41e-14!83;UBERON:0007285!1.41e-14!83;UBERON:0000119!1.86e-14!312;UBERON:0000486!7.44e-14!82;UBERON:0000483!1.20e-13!309;UBERON:0001134!1.55e-11!61;UBERON:0002036!1.55e-11!61;UBERON:0003082!1.55e-11!61;UBERON:0002049!6.90e-11!79;UBERON:0007798!6.90e-11!79;UBERON:0003914!1.28e-10!118;UBERON:0002385!1.47e-10!63;UBERON:0001015!1.47e-10!63;UBERON:0000383!1.47e-10!63;UBERON:0000481!3.10e-10!347;UBERON:0000475!3.12e-09!365;UBERON:0001637!6.35e-09!42;UBERON:0003509!6.35e-09!42;UBERON:0004572!6.35e-09!42;UBERON:0001981!8.99e-09!60;UBERON:0007500!8.99e-09!60;UBERON:0004537!8.99e-09!60;UBERON:0006965!8.99e-09!60;UBERON:0000055!2.34e-08!69;UBERON:0004872!4.74e-07!84;UBERON:0001048!7.36e-07!168 | |ontology_enrichment_uberon=UBERON:0005256!5.97e-18!143;UBERON:0003104!7.22e-18!238;UBERON:0009142!7.22e-18!238;UBERON:0002100!4.64e-16!216;UBERON:0000490!2.64e-15!138;UBERON:0004290!9.31e-15!70;UBERON:0000914!1.41e-14!83;UBERON:0002329!1.41e-14!83;UBERON:0003077!1.41e-14!83;UBERON:0003059!1.41e-14!83;UBERON:0007282!1.41e-14!83;UBERON:0009618!1.41e-14!83;UBERON:0007285!1.41e-14!83;UBERON:0000119!1.86e-14!312;UBERON:0000486!7.44e-14!82;UBERON:0000483!1.20e-13!309;UBERON:0001134!1.55e-11!61;UBERON:0002036!1.55e-11!61;UBERON:0003082!1.55e-11!61;UBERON:0002049!6.90e-11!79;UBERON:0007798!6.90e-11!79;UBERON:0003914!1.28e-10!118;UBERON:0002385!1.47e-10!63;UBERON:0001015!1.47e-10!63;UBERON:0000383!1.47e-10!63;UBERON:0000481!3.10e-10!347;UBERON:0000475!3.12e-09!365;UBERON:0001637!6.35e-09!42;UBERON:0003509!6.35e-09!42;UBERON:0004572!6.35e-09!42;UBERON:0001981!8.99e-09!60;UBERON:0007500!8.99e-09!60;UBERON:0004537!8.99e-09!60;UBERON:0006965!8.99e-09!60;UBERON:0000055!2.34e-08!69;UBERON:0004872!4.74e-07!84;UBERON:0001048!7.36e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.62e-07;37!UBERON:0001637;5.82e-07;42!UBERON:0003509;5.82e-07;42!UBERON:0004572;5.82e-07;42!UBERON:0003914;9.09e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0000072;1.62e-07;37!UBERON:0001637;5.82e-07;42!UBERON:0003509;5.82e-07;42!UBERON:0004572;5.82e-07;42!UBERON:0003914;9.09e-07;74 | ||
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| ||
|short_description=p3@CCDC86 | |short_description=p3@CCDC86 | ||
}} | }} |
Latest revision as of 14:02, 18 September 2015
Short description: | p3@CCDC86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC86_5end |
Coexpression cluster: | C3167_Alveolar_embryonic_Smooth_Mesenchymal_Pericytes_Hepatic_Endothelial |
Association with transcript: | -7bp_to_ENST00000227520_5end |
EntrezGene: | CCDC86 |
HGNC: | 28359 |
UniProt: | Q9H6F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.35e-18 | 250 |
epithelial cell | 6.77e-18 | 253 |
mesodermal cell | 1.07e-16 | 121 |
muscle precursor cell | 6.40e-12 | 58 |
myoblast | 6.40e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.40e-12 | 58 |
muscle cell | 2.12e-11 | 55 |
smooth muscle cell | 7.02e-10 | 43 |
smooth muscle myoblast | 7.02e-10 | 43 |
electrically responsive cell | 1.29e-09 | 61 |
electrically active cell | 1.29e-09 | 61 |
vascular associated smooth muscle cell | 1.14e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.46e-12 | 239 |
cancer | 4.23e-11 | 235 |
cell type cancer | 2.64e-09 | 143 |
carcinoma | 4.85e-08 | 106 |