FFCP PHASE1:Hg19::chr12:4872943..4872966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26290 | |EntrezGene=26290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4130 | |HGNC=4130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-167bp_to_ENST00000535354_5end | |association_with_transcript=-167bp_to_ENST00000535354_5end | ||
|cluster_id=chr12:4872943..4872966,+ | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_2_at_GALNT8_5end | |description=CAGE_peak_2_at_GALNT8_5end | ||
|id=chr12:4872943..4872966,+ | |id=chr12:4872943..4872966,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.21e-10!5;CL:0000188!1.43e-07!9 | |ontology_enrichment_celltype=CL:0002322!1.21e-10!5;CL:0000188!1.43e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.01e-30;5!CL:0002166;7.18e-14;3!CL:0002553;2.79e-11;1!CL:0000167;1.21e-10;1!CL:0000164;1.21e-10;1!CL:0000502;1.21e-10;1!CL:0000172;1.21e-10;1!CL:0000173;1.21e-10;1!CL:0002321;3.17e-10;15!CL:0000148;4.96e-09;10!CL:0002077;7.07e-09;34!CL:0002159;8.61e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.81e-30,5;CL:0002166,7.42e-14,3;CL:0002553,2.79e-11,1;CL:0000167,1.33e-10,1;CL:0000164,1.33e-10,1;CL:0000502,1.33e-10,1;CL:0000172,1.33e-10,1;CL:0000173,1.33e-10,1;CL:0002351,1.33e-10,1;CL:0002077,9.28e-10,34;CL:0000148,3.92e-09,10;CL:0000541,3.92e-09,10;CL:0002159,8.52e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002351;1.21e-10;1!UBERON:0009117;4.96e-09;10!UBERON:0005564;4.96e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;1.21e-10;1!DOID:4430;1.21e-10;1!DOID:3095;3.89e-07;22!DOID:2994;3.89e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.10e-10,1;DOID:4430,1.33e-10,1;DOID:3095,3.98e-07,22;DOID:2994,3.98e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-16!115;UBERON:0005743!1.05e-09!86;UBERON:0001017!9.53e-09!82;UBERON:0000473!1.13e-08!8;UBERON:0000073!4.14e-08!94;UBERON:0001016!4.14e-08!94;UBERON:0002346!4.93e-08!90;UBERON:0003135!4.99e-08!11;UBERON:0003075!6.64e-08!86;UBERON:0007284!6.64e-08!86;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001894!3.08e-07!7;UBERON:0006222!3.08e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.99e-16!115;UBERON:0005743!1.05e-09!86;UBERON:0001017!9.53e-09!82;UBERON:0000473!1.13e-08!8;UBERON:0000073!4.14e-08!94;UBERON:0001016!4.14e-08!94;UBERON:0002346!4.93e-08!90;UBERON:0003135!4.99e-08!11;UBERON:0003075!6.64e-08!86;UBERON:0007284!6.64e-08!86;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001894!3.08e-07!7;UBERON:0006222!3.08e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.72e-11;8!UBERON:0001708;1.24e-10;4!UBERON:0008895;1.24e-10;4!UBERON:0011159;1.11e-08;5!UBERON:0003135;2.96e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.35e-11,8;UBERON:0001708,1.27e-10,4;UBERON:0008895,1.27e-10,4;UBERON:0011159,1.13e-08,5;UBERON:0003135,3.32e-08,11;UBERON:0010188,2.30e-07,6;UBERON:0002539,2.30e-07,6;UBERON:0008816,2.30e-07,6 | |||
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| ||
|short_description=p2@GALNT8 | |short_description=p2@GALNT8 | ||
}} | }} |
Latest revision as of 14:03, 18 September 2015
Short description: | p2@GALNT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GALNT8_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | -167bp_to_ENST00000535354_5end |
EntrezGene: | GALNT8 |
HGNC: | 4130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.81e-30 | 5 |
epithelial cell of Malassez | 7.42e-14 | 3 |
lung fibroblast | 2.79e-11 | 1 |
peptide hormone secreting cell | 1.33e-10 | 1 |
enteroendocrine cell | 1.33e-10 | 1 |
type D enteroendocrine cell | 1.33e-10 | 1 |
somatostatin secreting cell | 1.33e-10 | 1 |
pancreatic D cell | 1.33e-10 | 1 |
progenitor cell of endocrine pancreas | 1.33e-10 | 1 |
ecto-epithelial cell | 9.28e-10 | 34 |
melanocyte | 3.92e-09 | 10 |
melanoblast | 3.92e-09 | 10 |
general ecto-epithelial cell | 8.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.35e-11 | 8 |
jaw skeleton | 1.27e-10 | 4 |
splanchnocranium | 1.27e-10 | 4 |
primary subdivision of cranial skeletal system | 1.13e-08 | 5 |
male reproductive organ | 3.32e-08 | 11 |
protuberance | 2.30e-07 | 6 |
pharyngeal arch | 2.30e-07 | 6 |
embryonic head | 2.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.10e-10 | 1 |
somatostatinoma | 1.33e-10 | 1 |
germ cell and embryonal cancer | 3.98e-07 | 22 |
germ cell cancer | 3.98e-07 | 22 |