FFCP PHASE1:Hg19::chr1:170632028..170632043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4R6 | |UniProt=G3V4R6 | ||
|association_with_transcript=159bp_to_ENST00000553786_5end | |association_with_transcript=159bp_to_ENST00000553786_5end | ||
|cluster_id=chr1:170632028..170632043,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_20_at_PRRX1_5end | |description=CAGE_peak_20_at_PRRX1_5end | ||
|id=chr1:170632028..170632043,+ | |id=chr1:170632028..170632043,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.27e-27!180;CL:0000057!1.98e-25!75;CL:0002620!1.11e-12!23;CL:0002494!4.14e-10!16;CL:0000680!6.02e-09!57;CL:0000056!6.02e-09!57;CL:0000355!6.02e-09!57;CL:0000359!2.21e-08!32;CL:0000048!4.71e-08!430;CL:0000187!8.46e-08!54;CL:0000723!1.64e-07!436;CL:0002551!3.01e-07!6;CL:0002556!4.95e-07!6;CL:0002334!5.36e-07!12;CL:0000034!7.89e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.27e-27!180;CL:0000057!1.98e-25!75;CL:0002620!1.11e-12!23;CL:0002494!4.14e-10!16;CL:0000680!6.02e-09!57;CL:0000056!6.02e-09!57;CL:0000355!6.02e-09!57;CL:0000359!2.21e-08!32;CL:0000048!4.71e-08!430;CL:0000187!8.46e-08!54;CL:0000723!1.64e-07!436;CL:0002551!3.01e-07!6;CL:0002556!4.95e-07!6;CL:0002334!5.36e-07!12;CL:0000034!7.89e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000569;2.37e-10;4!CL:0002551;3.75e-10;6!CL:0000057;4.75e-09;73!CL:0002539;6.16e-09;10!CL:0000359;1.89e-08;32!CL:0002494;1.96e-08;16!CL:0002552;3.86e-08;5!CL:0002573;2.04e-07;2!CL:0002556;4.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.27e-17,76;CL:0002551,1.63e-10,6;CL:0000569,2.73e-10,4;CL:0000011,2.73e-10,4;CL:0000048,4.05e-10,427;CL:0000723,9.23e-10,433;CL:0000034,2.67e-09,441;CL:0002539,6.81e-09,10;CL:0000359,9.77e-09,32;CL:0002494,1.93e-08,16;CL:0002552,3.63e-08,5;CL:0002573,1.18e-07,2;CL:0002556,3.72e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000011;2.37e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.23e-16!95;UBERON:0000914!2.79e-16!83;UBERON:0002329!2.79e-16!83;UBERON:0003077!2.79e-16!83;UBERON:0003059!2.79e-16!83;UBERON:0007282!2.79e-16!83;UBERON:0009618!2.79e-16!83;UBERON:0007285!2.79e-16!83;UBERON:0004872!3.57e-15!84;UBERON:0002199!9.05e-15!45;UBERON:0002416!9.05e-15!45;UBERON:0000948!2.57e-13!24;UBERON:0005498!2.57e-13!24;UBERON:0004140!2.57e-13!24;UBERON:0009881!2.57e-13!24;UBERON:0004141!2.57e-13!24;UBERON:0003084!2.57e-13!24;UBERON:0007005!2.57e-13!24;UBERON:0004139!2.57e-13!24;UBERON:0004291!2.57e-13!24;UBERON:0004290!3.72e-13!70;UBERON:0002097!2.88e-12!40;UBERON:0007100!4.38e-11!27;UBERON:0000486!5.11e-11!82;UBERON:0001637!2.86e-09!42;UBERON:0003509!2.86e-09!42;UBERON:0004572!2.86e-09!42;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0004573!1.66e-08!33;UBERON:0004571!1.66e-08!33;UBERON:0002385!5.40e-08!63;UBERON:0001015!5.40e-08!63;UBERON:0000383!5.40e-08!63;UBERON:0002067!6.00e-08!9;UBERON:0004016!6.00e-08!9;UBERON:0010083!6.00e-08!9;UBERON:0001981!7.99e-08!60;UBERON:0007500!7.99e-08!60;UBERON:0004537!7.99e-08!60;UBERON:0006965!7.99e-08!60;UBERON:0000475!1.07e-07!365;UBERON:0004535!1.53e-07!110;UBERON:0001758!4.95e-07!6;UBERON:0003672!4.95e-07!6;UBERON:0001009!5.05e-07!113;UBERON:0005256!6.63e-07!143 | |ontology_enrichment_uberon=UBERON:0003102!1.23e-16!95;UBERON:0000914!2.79e-16!83;UBERON:0002329!2.79e-16!83;UBERON:0003077!2.79e-16!83;UBERON:0003059!2.79e-16!83;UBERON:0007282!2.79e-16!83;UBERON:0009618!2.79e-16!83;UBERON:0007285!2.79e-16!83;UBERON:0004872!3.57e-15!84;UBERON:0002199!9.05e-15!45;UBERON:0002416!9.05e-15!45;UBERON:0000948!2.57e-13!24;UBERON:0005498!2.57e-13!24;UBERON:0004140!2.57e-13!24;UBERON:0009881!2.57e-13!24;UBERON:0004141!2.57e-13!24;UBERON:0003084!2.57e-13!24;UBERON:0007005!2.57e-13!24;UBERON:0004139!2.57e-13!24;UBERON:0004291!2.57e-13!24;UBERON:0004290!3.72e-13!70;UBERON:0002097!2.88e-12!40;UBERON:0007100!4.38e-11!27;UBERON:0000486!5.11e-11!82;UBERON:0001637!2.86e-09!42;UBERON:0003509!2.86e-09!42;UBERON:0004572!2.86e-09!42;UBERON:0001134!1.48e-08!61;UBERON:0002036!1.48e-08!61;UBERON:0003082!1.48e-08!61;UBERON:0004573!1.66e-08!33;UBERON:0004571!1.66e-08!33;UBERON:0002385!5.40e-08!63;UBERON:0001015!5.40e-08!63;UBERON:0000383!5.40e-08!63;UBERON:0002067!6.00e-08!9;UBERON:0004016!6.00e-08!9;UBERON:0010083!6.00e-08!9;UBERON:0001981!7.99e-08!60;UBERON:0007500!7.99e-08!60;UBERON:0004537!7.99e-08!60;UBERON:0006965!7.99e-08!60;UBERON:0000475!1.07e-07!365;UBERON:0004535!1.53e-07!110;UBERON:0001758!4.95e-07!6;UBERON:0003672!4.95e-07!6;UBERON:0001009!5.05e-07!113;UBERON:0005256!6.63e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.79e-13;9!UBERON:0004573;8.84e-11;33!UBERON:0004571;8.84e-11;33!UBERON:0004237;6.16e-09;10!UBERON:0004695;6.16e-09;10!UBERON:0002111;6.16e-09;10!UBERON:0004178;6.16e-09;10!UBERON:0000947;2.81e-08;21!UBERON:0010191;2.81e-08;21!UBERON:0002072;5.28e-08;5!UBERON:0001637;1.09e-07;42!UBERON:0003509;1.09e-07;42!UBERON:0004572;1.09e-07;42!UBERON:0000948;2.35e-07;22!UBERON:0001758;4.82e-07;6!UBERON:0003672;4.82e-07;6!UBERON:0002119;8.71e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,4.89e-13,9;UBERON:0004016,4.89e-13,9;UBERON:0010083,4.89e-13,9;UBERON:0004872,4.63e-12,83;UBERON:0004573,9.13e-12,33;UBERON:0004571,9.13e-12,33;UBERON:0002329,2.50e-11,71;UBERON:0003059,2.50e-11,71;UBERON:0007282,2.50e-11,71;UBERON:0004290,2.50e-11,71;UBERON:0009618,2.50e-11,71;UBERON:0003077,4.31e-11,72;UBERON:0007285,4.31e-11,72;UBERON:0000486,6.87e-11,83;UBERON:0007524,7.31e-11,73;UBERON:0001637,8.20e-10,42;UBERON:0003509,8.20e-10,42;UBERON:0004572,8.20e-10,42;UBERON:0007503,8.27e-10,78;UBERON:0003102,6.05e-09,99;UBERON:0004237,6.81e-09,10;UBERON:0004695,6.81e-09,10;UBERON:0002111,6.81e-09,10;UBERON:0004178,6.81e-09,10;UBERON:0002199,1.51e-08,46;UBERON:0002416,1.51e-08,46;UBERON:0000947,3.20e-08,21;UBERON:0010191,3.20e-08,21;UBERON:0000948,4.57e-08,24;UBERON:0005498,4.57e-08,24;UBERON:0004140,4.57e-08,24;UBERON:0009881,4.57e-08,24;UBERON:0004141,4.57e-08,24;UBERON:0003084,4.57e-08,24;UBERON:0007005,4.57e-08,24;UBERON:0004139,4.57e-08,24;UBERON:0004291,4.57e-08,24;UBERON:0002072,5.95e-08,5;UBERON:0004923,1.56e-07,66;UBERON:0001758,3.72e-07,6;UBERON:0003672,3.72e-07,6;UBERON:0007100,5.95e-07,27 | |||
|phase1_expression=1.81678379270557,0.642301571672949,0.140954404095971,0,0,0,0,2.52687949370732,1.04474251279935,0,0,0,0,0,0,2.01697543935533,3.61616716814386,2.92124036154949,4.39139518911456,0,0.204000691244253,0,0,0,0,3.36218985290986,4.51553241974702,4.171671409625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40597972162702,2.51577443545116,0.286836620748814,1.06400514659507,1.68203280042692,0,0.74000264525148,1.55605517699883,0.269421344139376,0.326923806226917,0,0,0,2.80944069147288,2.85235910772225,2.98897361103602,0.704606991862589,1.78060238804945,1.54495887372473,1.42907919878425,0.859840221182376,1.13658359293342,3.56400857184616,2.96720315134268,0,0,2.35670559535693,2.37725187756732,1.93944880838928,0.877955241761676,0.612975591598039,4.20666564938471,0.226864366320042,0.179389635688862,0.85422955527427,0.211931901159562,0,0.206105058476878,0.257640540045629,0.37223371266318,2.19409231913646,0.974370051611986,0,0.276149695926898,2.10139873864455,0.710019185033229,0.201504196455281,0.67824236924195,0,0,0,0,0,0,0,0,0,6.25798129319264,1.28648187638577,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.517086863031111,0,0,0.797814349754612,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0.144781306667579,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.87173775377726,0.178428988797162,0.788512075169673,1.05427273493442,0.300946099727719,0,0,1.99267679560631,0,1.91143951829782,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,0,0.640695746278505,1.02341449813341,0.160853921143607,0,1.54209693802656,2.48586415438378,1.56041596426237,3.11552657510173,0.581051892299796,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0.464845549297286,0,0.6970372701606,3.38836938193698,1.06461206063404,0,2.22389062924704,0.143124886741991,0,0,0,0,0.42793898803392,5.40945521474092,0,0,0,0,1.2130948894399,0,0.421258456238981,0,3.1682753652067,0,0,0,1.13008116620243,1.65409603063837,0.66343897524122,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0.35667105148125,0.709522128141196,1.05553817648832,1.64647446479951,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,6.0311554675924,0.622079175323615,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,2.21153028699708,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,2.1440859791201,0,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0.889811221596536,2.74608082076308,1.20984739010591,2.02068360757615,2.66139269981341,3.02663857611035,12.1446840284173,2.17368139626763,0.829412415681711,0.265841714557995,0.521745061811734,0.150257608997218,0,0,1.81848659202559,0.751873899297419,1.39210127963548,0,0,2.06037423109676,1.01024846629776,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0.314531883711793,0,0,8.92814664427068,0,0,1.90802610392051,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0.198916222116275,0.601682626794058,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,2.28632617667507,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,1.60342272946051,0,0.3414369541879,0.691259661814092,0,1.77498001095848,1.36341447614652,0,0,0,0,0,0,0,0,1.02662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,39.2768742784971,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0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| ||
|short_description=p20@PRRX1 | |short_description=p20@PRRX1 | ||
}} | }} |
Latest revision as of 14:03, 18 September 2015
Short description: | p20@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PRRX1_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 159bp_to_ENST00000553786_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | G3V4R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.27e-17 | 76 |
fibroblast of dermis | 1.63e-10 | 6 |
cardiac mesenchymal cell | 2.73e-10 | 4 |
migratory trunk neural crest cell | 2.73e-10 | 4 |
multi fate stem cell | 4.05e-10 | 427 |
somatic stem cell | 9.23e-10 | 433 |
stem cell | 2.67e-09 | 441 |
aortic smooth muscle cell | 6.81e-09 | 10 |
vascular associated smooth muscle cell | 9.77e-09 | 32 |
cardiocyte | 1.93e-08 | 16 |
fibroblast of gingiva | 3.63e-08 | 5 |
Schwann cell | 1.18e-07 | 2 |
fibroblast of periodontium | 3.72e-07 | 6 |