FFCP PHASE1:Hg19::chr11:60689789..60689814,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79073 | |EntrezGene=79073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28771 | |HGNC=28771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-275bp_to_ENST00000540280_5end | |association_with_transcript=-275bp_to_ENST00000540280_5end | ||
|cluster_id=chr11:60689789..60689814,+ | |||
|description=CAGE_peak_5_at_TMEM109_5end | |description=CAGE_peak_5_at_TMEM109_5end | ||
|id=chr11:60689789..60689814,+ | |id=chr11:60689789..60689814,+ | ||
|ontology_enrichment_celltype=CL:0000213!3.14e-07!57;CL:0000215!3.14e-07!57 | |ontology_enrichment_celltype=CL:0000213!3.14e-07!57;CL:0000215!3.14e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;2.83e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.71e-08,315;UBERON:0004120,4.71e-08,315;UBERON:0006603,4.71e-08,315;UBERON:0003064,8.21e-08,28;UBERON:0003513,8.22e-08,7;UBERON:0004876,1.99e-07,11;UBERON:0000080,3.67e-07,9;UBERON:0002120,3.67e-07,9;UBERON:0004875,3.67e-07,9;UBERON:0005721,3.67e-07,9;UBERON:0005754,3.67e-07,9;UBERON:0007297,3.67e-07,9 | |||
|phase1_expression=3.63356758541113,1.2846031433459,3.24195129420734,2.00146596706261,1.78784437770915,0.872338524100369,2.53299878168311,7.58063848112197,3.65659879479774,0,2.09340350391728,0,0.791300934685361,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0.816002764977012,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.236132343941038,0,0,0.309632246632152,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0.145398238779565,1.13362783106643,0.485168122375632,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,0.639337125799041,0.329851300186716,1.19678194572979,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0.786021525498329,0,0.668745981562712,0,0,0,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.520237390239513,0.493313713811028,0.276350017785848,0.289803085735052,0,0.535081656179426,1.04535523804977,0.453237370790265,0.383220493601921,1.03088233644789,0,0,0,0,0,0.639933055772092,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0.670700859703636,0.12786256184353,2.89151321907653,0.50133791063589,1.15877215168659,0,0,0.189069634328136,0,0.175669571386252,0.392937226493138,0.728590576585084,0.741568885568859,0,0,0.26591592103773,0,0,0.371457501329565,0,0,0,0,2.51699661725944,1.37559020970034,0.626984899610432,0.258416759169329,0.71153252537342,0,3.22263453687318,0.760272105718513,3.1728067481262,2.20597848207521,3.24056779152704,0.892997282840798,0.22452937262617,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,2.15271869829786,0,4.58938593198102,1.77334191099179,0,0,1.72667283892012,0.311211035399766,0.67355336034844,0.653847612453835,1.21085942115945,0,0.468642863667593,2.49728061464256,0.570471821544449,1.34503812496621,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0.103325781175765,2.37600571456411,1.48360157567134,0.910161361938026,1.43723628363248,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0.901428353439581,0.453728732640084,0.358779271377724,0,0.423863802319124,0,0.206105058476878,0.515281080091258,0.558350568994769,0,0.0974370051611986,1.51460264546469,0.368199594569197,0.80823028409406,0,0.503760491138201,0,0.386521706326594,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.348581828608555,0.414644220061482,0.252320850875628,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.482022059766964,0,0.435758888184812,0.237270619111097,0.269662616320329,0.784885860501384,0,1.4763109092493,1.40241773803446,0,0,0,0.982827216677626,1.77236972004421,0,0.122988438543114,0,0.878002283269004,0,0.301586917234893,0,0.651616610620649,0,0,0,0.117408694235822,1.15493158208859,3.24089858803628,0.761016608938393,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,1.49682337822484,2.48793738648926,1.72943944100354,3.28230326908588,0.190493682876507,4.96584953225761,2.34434894420094,6.84289784090821,1.64523988325318,0.901029173531752,1.71495859578347,0.672786506072164,0.43596006883328,0.22001485746285,0.129271715757778,10.7296933755565,1.690605505112,0,2.08014873822732,0,0,1.0656887160644,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.904318131178758,0.871533458600294,0.499864955910285,2.43247561282381,2.51128545716063,0,0.958499421966331,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,0.394061520403854,0.646882724578552,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0,1.00034104211935,0.813795071099207,0.831883446123229,0.535286966391485,0.315404830067869,0.234282829985426,0.902838299183157,0,3.10419213877515,0,0.184369168541703,1.65078867489357,1.56640925970192,1.71571711905428,0.206768026122887,0.647142602455851,0.426910231213777,3.63753085735511,0,0.604780586659361,0.248107807818777,0.153461973288062,0.841980283299221,1.40953064181271,0,0.482561763430822,1.48418066444991,0.616838775210622,0.710246901252508,0.410635780069046,1.55776328755086,0.813472649219715,1.69203229428271,0.200506470303285,0.828728900423067,0.34444334449382,0.728364672026868,1.96686622439136,1.35359883872224,0.15403067420883,0,0,0.105551628892876,1.13733384070897,1.53084334748864,0.431831832204279,9.25363516141736,1.89662506280697,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,1.95227036798582,1.44257416306811,0.27470839445503,0.165018999841176,0,0,0,2.61010939388729,0.154048617114644,0.3070073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| ||
|short_description=p5@TMEM109 | |short_description=p5@TMEM109 | ||
}} | }} |
Latest revision as of 14:29, 18 September 2015
Short description: | p5@TMEM109 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM109_5end |
Coexpression cluster: | NA |
Association with transcript: | -275bp_to_ENST00000540280_5end |
EntrezGene: | TMEM109 |
HGNC: | 28771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.71e-08 | 315 |
mesoderm-derived structure | 4.71e-08 | 315 |
presumptive mesoderm | 4.71e-08 | 315 |
intermediate mesoderm | 8.21e-08 | 28 |
trunk blood vessel | 8.22e-08 | 7 |
urogenital ridge | 1.99e-07 | 11 |
mesonephros | 3.67e-07 | 9 |
pronephros | 3.67e-07 | 9 |
nephrogenic cord | 3.67e-07 | 9 |
pronephric mesoderm | 3.67e-07 | 9 |
rostral part of nephrogenic cord | 3.67e-07 | 9 |
presumptive pronephric mesoderm | 3.67e-07 | 9 |