FFCP PHASE1:Hg19::chr1:54801538..54801563,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23648 | |EntrezGene=23648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15674 | |HGNC=15674 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528787_5end | |association_with_transcript=0bp_to_ENST00000528787_5end | ||
|cluster_id=chr1:54801538..54801563,- | |||
|description=CAGE_peak_2_at_SSBP3_5end | |description=CAGE_peak_2_at_SSBP3_5end | ||
|id=chr1:54801538..54801563,- | |id=chr1:54801538..54801563,- | ||
|ontology_enrichment_celltype=CL:0000055!3.66e-35!180;CL:0000680!1.31e-20!57;CL:0000056!1.31e-20!57;CL:0000355!1.31e-20!57;CL:0000183!2.02e-20!59;CL:0000187!2.57e-19!54;CL:0000222!7.15e-18!119;CL:0000192!1.08e-16!42;CL:0000514!1.08e-16!42;CL:0000057!1.54e-16!75;CL:0000220!4.76e-15!246;CL:0000393!6.81e-15!60;CL:0000211!6.81e-15!60;CL:0002321!1.71e-14!248;CL:0000359!1.40e-12!32;CL:0002371!5.12e-10!591;CL:0000144!9.56e-09!625;CL:0002620!5.60e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.66e-35!180;CL:0000680!1.31e-20!57;CL:0000056!1.31e-20!57;CL:0000355!1.31e-20!57;CL:0000183!2.02e-20!59;CL:0000187!2.57e-19!54;CL:0000222!7.15e-18!119;CL:0000192!1.08e-16!42;CL:0000514!1.08e-16!42;CL:0000057!1.54e-16!75;CL:0000220!4.76e-15!246;CL:0000393!6.81e-15!60;CL:0000211!6.81e-15!60;CL:0002321!1.71e-14!248;CL:0000359!1.40e-12!32;CL:0002371!5.12e-10!591;CL:0000144!9.56e-09!625;CL:0002620!5.60e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.78e-14;43!CL:0000359;3.98e-13;32!CL:0000187;6.66e-12;55!CL:0000393;4.12e-09;61!CL:0000211;4.12e-09;61!CL:0002620;2.38e-07;23!CL:0000057;2.46e-07;73!CL:0000134;3.28e-07;55!CL:0002320;8.69e-07;188 | |ontology_enrichment_celltype_v019=CL:0000192;5.78e-14;43!CL:0000359;3.98e-13;32!CL:0000187;6.66e-12;55!CL:0000393;4.12e-09;61!CL:0000211;4.12e-09;61!CL:0002620;2.38e-07;23!CL:0000057;2.46e-07;73!CL:0000134;3.28e-07;55!CL:0002320;8.69e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.18e-23,58;CL:0000056,2.18e-23,58;CL:0000355,2.18e-23,58;CL:0000187,6.16e-22,55;CL:0000192,7.26e-19,43;CL:0000514,7.26e-19,43;CL:0000393,1.31e-17,61;CL:0000211,1.31e-17,61;CL:0000057,2.28e-17,76;CL:0000222,4.95e-14,121;CL:0000359,5.36e-14,32;CL:0002321,2.31e-12,250;CL:0000723,2.10e-07,433;CL:0002620,3.78e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.78e-14;43!CL:0000355;2.98e-12;58 | |ontology_enrichment_development_v019=CL:0000514;5.78e-14;43!CL:0000355;2.98e-12;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.25e-24!83;UBERON:0002329!1.25e-24!83;UBERON:0003077!1.25e-24!83;UBERON:0003059!1.25e-24!83;UBERON:0007282!1.25e-24!83;UBERON:0009618!1.25e-24!83;UBERON:0007285!1.25e-24!83;UBERON:0004290!1.37e-22!70;UBERON:0000486!1.58e-20!82;UBERON:0005256!2.73e-20!143;UBERON:0002385!1.78e-19!63;UBERON:0001015!1.78e-19!63;UBERON:0000383!1.78e-19!63;UBERON:0001134!3.57e-19!61;UBERON:0002036!3.57e-19!61;UBERON:0003082!3.57e-19!61;UBERON:0000475!1.61e-17!365;UBERON:0002100!4.77e-15!216;UBERON:0003102!3.11e-14!95;UBERON:0000481!8.87e-13!347;UBERON:0003104!9.20e-13!238;UBERON:0009142!9.20e-13!238;UBERON:0002049!1.30e-12!79;UBERON:0007798!1.30e-12!79;UBERON:0004872!7.51e-12!84;UBERON:0000119!1.06e-11!312;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000483!3.65e-11!309;UBERON:0000490!4.37e-11!138;UBERON:0001981!5.23e-11!60;UBERON:0007500!5.23e-11!60;UBERON:0004537!5.23e-11!60;UBERON:0006965!5.23e-11!60;UBERON:0003914!8.54e-11!118;UBERON:0000055!3.15e-10!69;UBERON:0004573!9.90e-10!33;UBERON:0004571!9.90e-10!33;UBERON:0002199!2.14e-09!45;UBERON:0002416!2.14e-09!45;UBERON:0001009!5.29e-09!113;UBERON:0004535!5.81e-09!110;UBERON:0002097!3.24e-08!40;UBERON:0001444!1.22e-07!48;UBERON:0003103!2.79e-07!69 | |ontology_enrichment_uberon=UBERON:0000914!1.25e-24!83;UBERON:0002329!1.25e-24!83;UBERON:0003077!1.25e-24!83;UBERON:0003059!1.25e-24!83;UBERON:0007282!1.25e-24!83;UBERON:0009618!1.25e-24!83;UBERON:0007285!1.25e-24!83;UBERON:0004290!1.37e-22!70;UBERON:0000486!1.58e-20!82;UBERON:0005256!2.73e-20!143;UBERON:0002385!1.78e-19!63;UBERON:0001015!1.78e-19!63;UBERON:0000383!1.78e-19!63;UBERON:0001134!3.57e-19!61;UBERON:0002036!3.57e-19!61;UBERON:0003082!3.57e-19!61;UBERON:0000475!1.61e-17!365;UBERON:0002100!4.77e-15!216;UBERON:0003102!3.11e-14!95;UBERON:0000481!8.87e-13!347;UBERON:0003104!9.20e-13!238;UBERON:0009142!9.20e-13!238;UBERON:0002049!1.30e-12!79;UBERON:0007798!1.30e-12!79;UBERON:0004872!7.51e-12!84;UBERON:0000119!1.06e-11!312;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000483!3.65e-11!309;UBERON:0000490!4.37e-11!138;UBERON:0001981!5.23e-11!60;UBERON:0007500!5.23e-11!60;UBERON:0004537!5.23e-11!60;UBERON:0006965!5.23e-11!60;UBERON:0003914!8.54e-11!118;UBERON:0000055!3.15e-10!69;UBERON:0004573!9.90e-10!33;UBERON:0004571!9.90e-10!33;UBERON:0002199!2.14e-09!45;UBERON:0002416!2.14e-09!45;UBERON:0001009!5.29e-09!113;UBERON:0004535!5.81e-09!110;UBERON:0002097!3.24e-08!40;UBERON:0001444!1.22e-07!48;UBERON:0003103!2.79e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.16e-08;31!UBERON:0001015;2.16e-08;31!UBERON:0000383;2.16e-08;31!UBERON:0004573;3.07e-08;33!UBERON:0004571;3.07e-08;33!UBERON:0003102;5.45e-08;50!UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0002384;4.58e-07;198!UBERON:0002199;4.61e-07;46!UBERON:0002416;4.61e-07;46!UBERON:0002204;4.67e-07;70!UBERON:0002097;6.88e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002385;2.16e-08;31!UBERON:0001015;2.16e-08;31!UBERON:0000383;2.16e-08;31!UBERON:0004573;3.07e-08;33!UBERON:0004571;3.07e-08;33!UBERON:0003102;5.45e-08;50!UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0002384;4.58e-07;198!UBERON:0002199;4.61e-07;46!UBERON:0002416;4.61e-07;46!UBERON:0002204;4.67e-07;70!UBERON:0002097;6.88e-07;41 | ||
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| ||
|short_description=p2@SSBP3 | |short_description=p2@SSBP3 | ||
}} | }} |
Latest revision as of 14:43, 18 September 2015
Short description: | p2@SSBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SSBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528787_5end |
EntrezGene: | SSBP3 |
HGNC: | 15674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.18e-23 | 58 |
myoblast | 2.18e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-23 | 58 |
muscle cell | 6.16e-22 | 55 |
smooth muscle cell | 7.26e-19 | 43 |
smooth muscle myoblast | 7.26e-19 | 43 |
electrically responsive cell | 1.31e-17 | 61 |
electrically active cell | 1.31e-17 | 61 |
fibroblast | 2.28e-17 | 76 |
mesodermal cell | 4.95e-14 | 121 |
vascular associated smooth muscle cell | 5.36e-14 | 32 |
embryonic cell | 2.31e-12 | 250 |
somatic stem cell | 2.10e-07 | 433 |
skin fibroblast | 3.78e-07 | 23 |