FFCP PHASE1:Hg19::chr17:10560619..10560631,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4621 | |EntrezGene=4621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7573 | |HGNC=7573 | ||
|TSSclassifier=strong | |||
|UniProt=P11055 | |UniProt=P11055 | ||
|association_with_transcript=0bp_to_NM_002470_5end | |association_with_transcript=0bp_to_NM_002470_5end | ||
|cluster_id=chr17:10560619..10560631,- | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_MYH3_5end | |description=CAGE_peak_1_at_MYH3_5end | ||
|id=chr17:10560619..10560631,- | |id=chr17:10560619..10560631,- | ||
|ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57 | |ontology_enrichment_celltype=CL:0000188!2.26e-17!9;CL:0000594!2.73e-08!3;CL:0000680!8.54e-07!57;CL:0000056!8.54e-07!57;CL:0000355!8.54e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000188;4.57e-34;9!CL:0000680;6.99e-17;7!CL:0000594;3.35e-15;3!CL:0002615;3.65e-07;3!CL:0000515;4.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.98e-34,9;CL:0000594,3.69e-15,3;CL:0000680,1.74e-09,58;CL:0000056,1.74e-09,58;CL:0000355,1.74e-09,58;CL:0002615,3.76e-07,3;CL:0000187,5.56e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000355;2.28e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.39e-11!63;UBERON:0001015!2.39e-11!63;UBERON:0000383!2.39e-11!63;UBERON:0001134!1.44e-10!61;UBERON:0002036!1.44e-10!61;UBERON:0003082!1.44e-10!61;UBERON:0004290!1.62e-09!70;UBERON:0007023!1.82e-08!115;UBERON:0000914!4.09e-08!83;UBERON:0002329!4.09e-08!83;UBERON:0003077!4.09e-08!83;UBERON:0003059!4.09e-08!83;UBERON:0007282!4.09e-08!83;UBERON:0009618!4.09e-08!83;UBERON:0007285!4.09e-08!83;UBERON:0006947!1.51e-07!3;UBERON:0004054!1.51e-07!3;UBERON:0000486!2.32e-07!82;UBERON:0005256!6.87e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.62e-49;16!UBERON:0002036;2.62e-49;16!UBERON:0002385;2.09e-27;31!UBERON:0001015;2.09e-27;31!UBERON:0000383;2.09e-27;31!UBERON:0000341;7.73e-11;2!UBERON:0003127;8.96e-11;2!UBERON:0003688;1.40e-07;6!UBERON:0002358;1.40e-07;6!UBERON:0003684;1.40e-07;6!UBERON:0001178;1.40e-07;6!UBERON:0002204;9.96e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,8.24e-16,64;UBERON:0001015,8.24e-16,64;UBERON:0000383,8.24e-16,64;UBERON:0001134,2.69e-14,62;UBERON:0002036,2.69e-14,62;UBERON:0003082,2.69e-14,62;UBERON:0002329,4.55e-12,71;UBERON:0003059,4.55e-12,71;UBERON:0007282,4.55e-12,71;UBERON:0004290,4.55e-12,71;UBERON:0009618,4.55e-12,71;UBERON:0003077,7.42e-12,72;UBERON:0007285,7.42e-12,72;UBERON:0007524,1.20e-11,73;UBERON:0005256,2.89e-11,122;UBERON:0000341,7.73e-11,2;UBERON:0003127,9.41e-11,2;UBERON:0007503,1.07e-10,78;UBERON:0002100,1.64e-10,199;UBERON:0000486,7.38e-10,83;UBERON:0003688,1.44e-07,6;UBERON:0002358,1.44e-07,6;UBERON:0003684,1.44e-07,6;UBERON:0001178,1.44e-07,6;UBERON:0003104,1.46e-07,160;UBERON:0009142,1.46e-07,160;UBERON:0000490,1.73e-07,148;UBERON:0002204,6.21e-07,167 | |||
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| ||
|short_description=p1@MYH3 | |short_description=p1@MYH3 | ||
}} | }} |
Latest revision as of 15:17, 18 September 2015
Short description: | p1@MYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYH3_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_NM_002470_5end |
EntrezGene: | MYH3 |
HGNC: | 7573 |
UniProt: | P11055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.98e-34 | 9 |
skeletal muscle satellite cell | 3.69e-15 | 3 |
muscle precursor cell | 1.74e-09 | 58 |
myoblast | 1.74e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-09 | 58 |
adipocyte of omentum tissue | 3.76e-07 | 3 |
muscle cell | 5.56e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 8.24e-16 | 64 |
musculature | 8.24e-16 | 64 |
musculature of body | 8.24e-16 | 64 |
skeletal muscle tissue | 2.69e-14 | 62 |
striated muscle tissue | 2.69e-14 | 62 |
myotome | 2.69e-14 | 62 |
somite | 4.55e-12 | 71 |
presomitic mesoderm | 4.55e-12 | 71 |
presumptive segmental plate | 4.55e-12 | 71 |
dermomyotome | 4.55e-12 | 71 |
trunk paraxial mesoderm | 4.55e-12 | 71 |
paraxial mesoderm | 7.42e-12 | 72 |
presumptive paraxial mesoderm | 7.42e-12 | 72 |
dense mesenchyme tissue | 1.20e-11 | 73 |
trunk mesenchyme | 2.89e-11 | 122 |
throat | 7.73e-11 | 2 |
open tracheal system trachea | 9.41e-11 | 2 |
epithelial vesicle | 1.07e-10 | 78 |
trunk | 1.64e-10 | 199 |
multilaminar epithelium | 7.38e-10 | 83 |
omentum | 1.44e-07 | 6 |
peritoneum | 1.44e-07 | 6 |
abdominal cavity | 1.44e-07 | 6 |
visceral peritoneum | 1.44e-07 | 6 |
mesenchyme | 1.46e-07 | 160 |
entire embryonic mesenchyme | 1.46e-07 | 160 |
unilaminar epithelium | 1.73e-07 | 148 |
musculoskeletal system | 6.21e-07 | 167 |