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FFCP PHASE1:Hg19::chr17:11144505..11144535,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=388336
|EntrezGene=388336
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=34491
|HGNC=34491
|TSSclassifier=strong
|UniProt=Q6ZSJ9
|UniProt=Q6ZSJ9
|association_with_transcript=-44bp_to_ENST00000432116,ENST00000441885_5end
|association_with_transcript=-44bp_to_ENST00000432116,ENST00000441885_5end
|cluster_id=chr17:11144505..11144535,+
|coexpression_cluster_id=C1014
|description=CAGE_peak_1_at_SHISA6_5end
|description=CAGE_peak_1_at_SHISA6_5end
|id=chr17:11144505..11144535,+
|id=chr17:11144505..11144535,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006215;1.97e-26;3!UBERON:0006241;9.63e-13;3!UBERON:0003057;9.63e-13;3!UBERON:0006222;5.53e-10;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.71e-44!57;UBERON:0005068!1.71e-44!57;UBERON:0006241!1.71e-44!57;UBERON:0007135!1.71e-44!57;UBERON:0007023!7.09e-43!115;UBERON:0002616!3.02e-35!59;UBERON:0001017!7.21e-35!82;UBERON:0005743!2.62e-34!86;UBERON:0000073!2.95e-33!94;UBERON:0001016!2.95e-33!94;UBERON:0002346!2.45e-31!90;UBERON:0003075!7.54e-30!86;UBERON:0007284!7.54e-30!86;UBERON:0000955!8.60e-30!69;UBERON:0006238!8.60e-30!69;UBERON:0002780!1.18e-28!41;UBERON:0001890!1.18e-28!41;UBERON:0006240!1.18e-28!41;UBERON:0002020!2.05e-28!34;UBERON:0003528!2.05e-28!34;UBERON:0001893!4.20e-28!34;UBERON:0003080!8.92e-28!42;UBERON:0002791!1.48e-26!33;UBERON:0001869!2.60e-25!32;UBERON:0002619!1.76e-23!22;UBERON:0000956!4.06e-20!25;UBERON:0000203!4.06e-20!25;UBERON:0001950!4.77e-20!20;UBERON:0000924!9.91e-20!173;UBERON:0006601!9.91e-20!173;UBERON:0004121!1.76e-18!169;UBERON:0003076!2.69e-18!15;UBERON:0003057!2.69e-18!15;UBERON:0003056!5.94e-18!61;UBERON:0000153!4.59e-17!129;UBERON:0007811!4.59e-17!129;UBERON:0000033!1.55e-16!123;UBERON:0004733!3.42e-13!12;UBERON:0002028!3.42e-13!12;UBERON:0007277!3.42e-13!12;UBERON:0002298!3.01e-12!8;UBERON:0004732!5.36e-12!13;UBERON:0001871!1.06e-11!7;UBERON:0000349!2.08e-10!5;UBERON:0000025!3.78e-10!194;UBERON:0002308!8.73e-10!9;UBERON:0000125!8.73e-10!9;UBERON:0002420!1.41e-09!9;UBERON:0007245!1.41e-09!9;UBERON:0010009!1.41e-09!9;UBERON:0010011!1.41e-09!9;UBERON:0000454!1.41e-09!9;UBERON:0004111!2.81e-09!241;UBERON:0000200!3.42e-08!6;UBERON:0002680!3.48e-08!9;UBERON:0001895!3.48e-08!9;UBERON:0010092!3.48e-08!9;UBERON:0000988!2.74e-07!3;UBERON:0001896!3.15e-07!3;UBERON:0005290!3.15e-07!3;UBERON:0010096!3.15e-07!3;UBERON:0002240!4.67e-07!3;UBERON:0006331!8.65e-07!3
|ontology_enrichment_uberon_v019=UBERON:0004733;2.47e-45;12!UBERON:0002028;2.47e-45;12!UBERON:0004732;8.79e-42;13!UBERON:0002298;1.88e-36;6!UBERON:0002680;3.25e-34;9!UBERON:0001895;3.25e-34;9!UBERON:0000988;7.84e-27;3!UBERON:0000073;1.27e-20;53!UBERON:0002616;1.27e-20;53!UBERON:0001954;1.25e-18;2!UBERON:0002148;1.25e-18;2!UBERON:0006331;1.25e-18;2!UBERON:0009662;1.25e-18;2!UBERON:0003022;1.25e-18;2!UBERON:0002421;1.25e-18;2!UBERON:0002600;1.25e-18;2!UBERON:0002037;1.56e-13;6!UBERON:0002619;3.66e-13;22!UBERON:0001896;8.31e-13;3!UBERON:0005290;8.31e-13;3!UBERON:0002240;9.63e-13;3!UBERON:0005174;9.63e-13;3!UBERON:0001137;9.63e-13;3!UBERON:0003528;3.66e-12;34!UBERON:0002020;3.66e-12;34!UBERON:0000955;1.07e-11;68!UBERON:0001017;1.10e-11;75!UBERON:0000956;1.36e-11;25!UBERON:0000203;1.36e-11;25!UBERON:0001016;1.47e-11;83!UBERON:0005795;5.53e-10;1!UBERON:0002050;4.94e-08;5!UBERON:0005423;4.94e-08;5!UBERON:0002780;5.05e-08;41!UBERON:0001890;5.05e-08;41!UBERON:0000349;5.39e-08;5!UBERON:0002791;2.78e-07;32!UBERON:0001869;3.17e-07;32!UBERON:0001893;4.82e-07;34!UBERON:0001950;9.08e-07;20
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|short_description=p1@SHISA6
|short_description=p1@SHISA6
}}
}}

Latest revision as of 15:52, 18 September 2015

Short description:p1@SHISA6
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SHISA6_5end
Coexpression cluster:C1014_hippocampus_locus_spinal_medulla_neuroectodermal_cerebellum_thalamus
Association with transcript: -44bp_to_ENST00000432116, ENST00000441885_5end
EntrezGene:SHISA6
HGNC: 34491
UniProt: Q6ZSJ9
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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