FFCP PHASE1:Hg19::chr1:56982690..56982709,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:56982690..56982709,-
|short_description=p7@PPAP2B
|description=CAGE_peak_7_at_PPAP2B_5end
|association_with_transcript=-12bp_to_ENST00000472957_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8613 | |EntrezGene=8613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9229 | |HGNC=9229 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000472957_5end | |||
|cluster_id=chr1:56982690..56982709,- | |||
|description=CAGE_peak_7_at_PPAP2B_5end | |||
|id=chr1:56982690..56982709,- | |||
|ontology_enrichment_celltype=CL:0002057!9.89e-27!42;CL:0002194!1.31e-26!63;CL:0000576!1.31e-26!63;CL:0000040!1.31e-26!63;CL:0000559!1.31e-26!63;CL:0002009!3.47e-25!65;CL:0000860!7.18e-24!45;CL:0000839!5.26e-22!70;CL:0000557!1.99e-21!71;CL:0000766!1.42e-20!76;CL:0002087!2.50e-12!119;CL:0000763!1.37e-11!112;CL:0000049!1.37e-11!112;CL:0002031!4.53e-10!124;CL:0000738!1.14e-08!140;CL:0002076!3.38e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-42;33!CL:0002057;1.71e-42;33!CL:0000473;4.19e-40;39!CL:0000234;4.19e-40;39!CL:0000576;2.93e-25;48!CL:0000766;7.53e-16;69!CL:0000763;3.50e-07;100!CL:0000235;6.39e-07;6!CL:0002087;9.03e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.09e-47,48;CL:0000234,5.09e-47,48;CL:0002194,4.96e-46,59;CL:0000576,4.96e-46,59;CL:0000040,4.96e-46,59;CL:0000559,4.96e-46,59;CL:0002009,4.26e-44,61;CL:0000860,2.07e-41,42;CL:0002057,2.07e-41,42;CL:0000839,8.93e-40,66;CL:0000557,5.47e-39,67;CL:0000766,2.21e-35,72;CL:0002087,7.16e-22,115;CL:0000763,1.91e-20,108;CL:0000049,1.91e-20,108;CL:0002031,2.11e-20,120;CL:0000738,1.86e-16,136;CL:0002032,1.19e-12,161;CL:0000837,1.19e-12,161;CL:0000037,1.31e-11,168;CL:0000988,2.11e-10,177;CL:0000235,7.08e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-31;42!CL:0000049;8.03e-07;108 | |||
|ontology_enrichment_disease=DOID:1749!5.83e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.33e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.18e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-18!80;UBERON:0001474!4.22e-16!86;UBERON:0004765!9.13e-14!101;UBERON:0001434!9.13e-14!101;UBERON:0002390!1.59e-13!102;UBERON:0003061!1.59e-13!102;UBERON:0002193!2.50e-11!112;UBERON:0002405!8.90e-11!115;UBERON:0000062!3.50e-08!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.72e-07;11!UBERON:0006947;9.62e-07;3!UBERON:0004054;9.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.79e-34,76;UBERON:0001474,5.47e-31,82;UBERON:0004765,1.97e-28,90;UBERON:0002405,8.76e-26,93;UBERON:0001434,2.85e-24,100;UBERON:0002390,8.21e-24,98;UBERON:0003061,8.21e-24,98;UBERON:0002193,1.98e-20,108;UBERON:0002204,2.95e-10,167;UBERON:0003081,2.10e-09,203;UBERON:0003135,1.66e-07,11;UBERON:0006947,9.97e-07,3;UBERON:0004054,9.97e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.873765488520689,0.527533956456907,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0.916960868975415,1.23150884174919,0.944529375764151,0,0,0.309632246632152,0,0,1.47901604066715,1.23947520928483,0,0,1.66198622559563,1.20326668482085,1.08505435357926,0.895661896959697,1.29557466407592,1.28787783817093,1.45398238779565,2.64513160582167,1.21292030593908,3.25400651667958,5.34518254428373,6.50383378879718,2.58923153089935,4.35473201099471,6.14853797710322,8.27389633767885,12.9096936716765,17.6054432572644,5.08254316765033,4.36649840092553,3.59557575112135,5.20342617030534,5.77672248736969,1.27867425159808,1.64925650093358,3.19141852194611,1.27867425159808,3.19230162491442,7.94339314567596,3.11411124497787,4.52247597462138,8.34372669472322,5.2125322729228,3.02699751316684,8.83866326370155,3.16462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,2.27183175558278,1.74129737299267,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,2.00763216772303,0,0,0.580969714347592,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,1.1240175325762,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,2.70838706696137,2.34004265139238,1.78357394746474,0.93733833986777,1.00789276919316,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,1.81289174387433,2.80709058424599,1.47329582297434,0,0,0,0,1.30926073077505,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.127612712494584,1.11273558941105,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.384888450902048,1.34060455107157,0,3.85989583184795,0.43050537267123,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,1.11362469558097,0,0,0,0,0.748562161632879,0.146508179271894,0,0,0,1.19372242368845,1.78178808499583,2.45728561679386,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,5.90807066213134,0,0.179736702294654,40.8168278260389,0,0.690503839458535,0,0,0.969332746095218,0,0,0.260427761085233,0.0874599999961957,0,1.82069517256799,1.01701460117107,2.83665218121524,0,0,0,0,0.241192877250816,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0.23056390438806,0.718061155278177,2.39024218228418,2.55200927785536,0.549585560411174,3.19820865611181,0,0,0,0.451191321234361,0.392125068635479,0.335643173951685,0,0,0,2.12202650606892,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,4.89161547330224,0,6.70793484843964,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,1.56203764501618,1.37189356380129,0.174118413160805,2.27144668714639,0,0,0,0,0.581934098930517,0,0,0,0.993573058514948,0,1.75996244461323,2.08412932653988,1.92107695265417,0,1.87317542300338,0,0,0,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,3.35434687599266,2.52178263357434,1.36381929150995,0,0,0.959575986597226,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0.52893040697076,0,7.04815022316672,0.533937062838473,0,2.07119527673598,0,0,0.487170393523584,3.19170628885091,0,0,0,0,12.8784358925192,0,0,0,0,0,0.18628920882415,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,1.69049698686902,0,0,1.03328987796489,0,0,0.279759015438889,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,4.2203518955441,5.42660727399606,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,0,0.887136517302272,0.0675375846183947,0,0.206686796501184,0,0,2.74128883428591,0.496211178389294,0,1.02209942111676,0,0,0,0.455324382702595,6.29786828154736,0.921871900446234,0,0.0679697329768317,0,0,0,0.39246546425257,0,3.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| ||
|short_description=p7@PPAP2B | |||
}} | }} |
Latest revision as of 15:59, 18 September 2015
Short description: | p7@PPAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PPAP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000472957_5end |
EntrezGene: | PPAP2B |
HGNC: | 9229 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.09e-47 | 48 |
phagocyte | 5.09e-47 | 48 |
monopoietic cell | 4.96e-46 | 59 |
monocyte | 4.96e-46 | 59 |
monoblast | 4.96e-46 | 59 |
promonocyte | 4.96e-46 | 59 |
macrophage dendritic cell progenitor | 4.26e-44 | 61 |
classical monocyte | 2.07e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-41 | 42 |
myeloid lineage restricted progenitor cell | 8.93e-40 | 66 |
granulocyte monocyte progenitor cell | 5.47e-39 | 67 |
myeloid leukocyte | 2.21e-35 | 72 |
nongranular leukocyte | 7.16e-22 | 115 |
myeloid cell | 1.91e-20 | 108 |
common myeloid progenitor | 1.91e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 2.11e-20 | 120 |
leukocyte | 1.86e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.19e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-12 | 161 |
hematopoietic stem cell | 1.31e-11 | 168 |
hematopoietic cell | 2.11e-10 | 177 |
macrophage | 7.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.79e-34 | 76 |
bone element | 5.47e-31 | 82 |
skeletal element | 1.97e-28 | 90 |
immune system | 8.76e-26 | 93 |
skeletal system | 2.85e-24 | 100 |
hematopoietic system | 8.21e-24 | 98 |
blood island | 8.21e-24 | 98 |
hemolymphoid system | 1.98e-20 | 108 |
musculoskeletal system | 2.95e-10 | 167 |
lateral plate mesoderm | 2.10e-09 | 203 |
male reproductive organ | 1.66e-07 | 11 |
male genital duct | 9.97e-07 | 3 |
internal male genitalia | 9.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.18e-12 | 14 |