FFCP PHASE1:Hg19::chr8:60031840..60031869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9760 | |EntrezGene=9760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18988 | |HGNC=18988 | ||
|TSSclassifier=strong | |||
|UniProt=O94900,B4DYA1 | |UniProt=O94900,B4DYA1 | ||
|association_with_transcript=-73bp_to_ENST00000361421,ENST00000456290,NM_014729,uc003xtw.1_5end | |association_with_transcript=-73bp_to_ENST00000361421,ENST00000456290,NM_014729,uc003xtw.1_5end | ||
|cluster_id=chr8:60031840..60031869,- | |||
|coexpression_cluster_id=C2926 | |coexpression_cluster_id=C2926 | ||
|description=CAGE_peak_5_at_TOX_5end | |description=CAGE_peak_5_at_TOX_5end | ||
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|ontology_enrichment_celltype=CL:0002319!8.81e-07!25 | |ontology_enrichment_celltype=CL:0002319!8.81e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.80e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;4.80e-07;25 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.24e-17!82;UBERON:0005743!1.61e-17!86;UBERON:0000153!8.20e-17!129;UBERON:0007811!8.20e-17!129;UBERON:0000073!2.71e-15!94;UBERON:0001016!2.71e-15!94;UBERON:0000033!2.79e-15!123;UBERON:0000955!4.80e-15!69;UBERON:0006238!4.80e-15!69;UBERON:0003075!5.66e-14!86;UBERON:0007284!5.66e-14!86;UBERON:0003056!1.06e-13!61;UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0002780!7.68e-13!41;UBERON:0001890!7.68e-13!41;UBERON:0006240!7.68e-13!41;UBERON:0002616!9.28e-13!59;UBERON:0004121!2.03e-12!169;UBERON:0002346!2.83e-12!90;UBERON:0003080!3.57e-12!42;UBERON:0001869!1.24e-11!32;UBERON:0000924!2.38e-11!173;UBERON:0006601!2.38e-11!173;UBERON:0001893!5.99e-11!34;UBERON:0000956!8.24e-11!25;UBERON:0000203!8.24e-11!25;UBERON:0002020!9.65e-11!34;UBERON:0003528!9.65e-11!34;UBERON:0002791!1.70e-10!33;UBERON:0002619!3.77e-09!22;UBERON:0001950!7.70e-09!20;UBERON:0007023!1.11e-07!115 | |ontology_enrichment_uberon=UBERON:0001017!1.24e-17!82;UBERON:0005743!1.61e-17!86;UBERON:0000153!8.20e-17!129;UBERON:0007811!8.20e-17!129;UBERON:0000073!2.71e-15!94;UBERON:0001016!2.71e-15!94;UBERON:0000033!2.79e-15!123;UBERON:0000955!4.80e-15!69;UBERON:0006238!4.80e-15!69;UBERON:0003075!5.66e-14!86;UBERON:0007284!5.66e-14!86;UBERON:0003056!1.06e-13!61;UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0002780!7.68e-13!41;UBERON:0001890!7.68e-13!41;UBERON:0006240!7.68e-13!41;UBERON:0002616!9.28e-13!59;UBERON:0004121!2.03e-12!169;UBERON:0002346!2.83e-12!90;UBERON:0003080!3.57e-12!42;UBERON:0001869!1.24e-11!32;UBERON:0000924!2.38e-11!173;UBERON:0006601!2.38e-11!173;UBERON:0001893!5.99e-11!34;UBERON:0000956!8.24e-11!25;UBERON:0000203!8.24e-11!25;UBERON:0002020!9.65e-11!34;UBERON:0003528!9.65e-11!34;UBERON:0002791!1.70e-10!33;UBERON:0002619!3.77e-09!22;UBERON:0001950!7.70e-09!20;UBERON:0007023!1.11e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.74e-13;25!UBERON:0000203;1.74e-13;25!UBERON:0001950;6.71e-12;20!UBERON:0001869;2.73e-11;32!UBERON:0002619;1.74e-10;22!UBERON:0002791;8.78e-10;32!UBERON:0001893;1.14e-09;34!UBERON:0003528;4.32e-09;34!UBERON:0002020;4.32e-09;34!UBERON:0000160;1.90e-08;17!UBERON:0000200;2.35e-07;6!UBERON:0005409;2.50e-07;22!UBERON:0000059;8.58e-07;11!UBERON:0001155;9.13e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000956;1.74e-13;25!UBERON:0000203;1.74e-13;25!UBERON:0001950;6.71e-12;20!UBERON:0001869;2.73e-11;32!UBERON:0002619;1.74e-10;22!UBERON:0002791;8.78e-10;32!UBERON:0001893;1.14e-09;34!UBERON:0003528;4.32e-09;34!UBERON:0002020;4.32e-09;34!UBERON:0000160;1.90e-08;17!UBERON:0000200;2.35e-07;6!UBERON:0005409;2.50e-07;22!UBERON:0000059;8.58e-07;11!UBERON:0001155;9.13e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.58e-13,25;UBERON:0000203,1.58e-13,25;UBERON:0001950,4.21e-12,20;UBERON:0001869,5.63e-12,32;UBERON:0003056,2.80e-11,61;UBERON:0001893,5.91e-11,34;UBERON:0002791,1.04e-10,32;UBERON:0002619,1.15e-10,22;UBERON:0003528,8.74e-10,34;UBERON:0002020,8.74e-10,34;UBERON:0004121,1.19e-09,171;UBERON:0000924,1.19e-09,171;UBERON:0006601,1.19e-09,171;UBERON:0001017,1.60e-09,81;UBERON:0003075,3.37e-09,82;UBERON:0007284,3.37e-09,82;UBERON:0002780,4.35e-09,41;UBERON:0001890,4.35e-09,41;UBERON:0003080,4.35e-09,41;UBERON:0006240,4.35e-09,41;UBERON:0011216,1.11e-08,223;UBERON:0000160,1.12e-08,17;UBERON:0001016,1.79e-08,89;UBERON:0002346,2.26e-08,86;UBERON:0000073,4.57e-08,53;UBERON:0002616,4.57e-08,53;UBERON:0000955,8.91e-08,68;UBERON:0006238,8.91e-08,68;UBERON:0010371,1.03e-07,104;UBERON:0000200,1.08e-07,6;UBERON:0001049,2.57e-07,56;UBERON:0005068,2.57e-07,56;UBERON:0006241,2.57e-07,56;UBERON:0007135,2.57e-07,56;UBERON:0000059,9.73e-07,11 | |||
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| ||
|short_description=p5@TOX | |short_description=p5@TOX | ||
}} | }} |
Latest revision as of 16:15, 18 September 2015
Short description: | p5@TOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TOX_5end |
Coexpression cluster: | C2926_small_glioblastoma_chronic_occipital_tridermal_nonsmall_lymphoma |
Association with transcript: | -73bp_to_ENST00000361421, ENST00000456290, NM_014729, uc003xtw.1_5end |
EntrezGene: | TOX |
HGNC: | 18988 |
UniProt: | O94900B4DYA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.58e-13 | 25 |
pallium | 1.58e-13 | 25 |
neocortex | 4.21e-12 | 20 |
cerebral hemisphere | 5.63e-12 | 32 |
pre-chordal neural plate | 2.80e-11 | 61 |
telencephalon | 5.91e-11 | 34 |
regional part of telencephalon | 1.04e-10 | 32 |
regional part of cerebral cortex | 1.15e-10 | 22 |
brain grey matter | 8.74e-10 | 34 |
gray matter | 8.74e-10 | 34 |
ectoderm-derived structure | 1.19e-09 | 171 |
ectoderm | 1.19e-09 | 171 |
presumptive ectoderm | 1.19e-09 | 171 |
central nervous system | 1.60e-09 | 81 |
neural plate | 3.37e-09 | 82 |
presumptive neural plate | 3.37e-09 | 82 |
regional part of forebrain | 4.35e-09 | 41 |
forebrain | 4.35e-09 | 41 |
anterior neural tube | 4.35e-09 | 41 |
future forebrain | 4.35e-09 | 41 |
organ system subdivision | 1.11e-08 | 223 |
intestine | 1.12e-08 | 17 |
nervous system | 1.79e-08 | 89 |
neurectoderm | 2.26e-08 | 86 |
regional part of nervous system | 4.57e-08 | 53 |
regional part of brain | 4.57e-08 | 53 |
brain | 8.91e-08 | 68 |
future brain | 8.91e-08 | 68 |
ecto-epithelium | 1.03e-07 | 104 |
gyrus | 1.08e-07 | 6 |
neural tube | 2.57e-07 | 56 |
neural rod | 2.57e-07 | 56 |
future spinal cord | 2.57e-07 | 56 |
neural keel | 2.57e-07 | 56 |
large intestine | 9.73e-07 | 11 |