FFCP PHASE1:Hg19::chr12:49961883..49961933,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:49961883..49961933,-
|short_description=p1@MCRS1
|description=CAGE_peak_1_at_MCRS1_5end
|association_with_transcript=0bp_to_ENST00000546244,ENST0000054860...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10445 | |EntrezGene=10445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6960 | |HGNC=6960 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z372,F8VZC2,F8W126,Q96EZ8 | |UniProt=Q7Z372,F8VZC2,F8W126,Q96EZ8 | ||
|association_with_transcript=0bp_to_ENST00000546244,ENST00000548602,ENST00000549000,ENST00000550165,ENST00000552206,ENST00000553173,NM_006337,uc001ruk.1,uc001rul.1,uc001rum.1,uc001run.1,uc009zlj.1_5end | |||
|cluster_id=chr12:49961883..49961933,- | |||
|coexpression_cluster_id=C1671 | |||
|description=CAGE_peak_1_at_MCRS1_5end | |||
|id=chr12:49961883..49961933,- | |||
|ontology_enrichment_celltype=CL:0000003!9.24e-28!722;CL:0000012!4.08e-23!682;CL:0000548!4.38e-23!679;CL:0000004!4.38e-23!679;CL:0000255!4.38e-23!679;CL:0000144!6.14e-20!625;CL:0002371!1.67e-16!591;CL:0000063!2.23e-11!578;CL:0002321!2.19e-09!248;CL:0000220!4.77e-09!246;CL:0000066!5.48e-09!254;CL:0000222!4.93e-07!119;CL:1000449!9.98e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.79e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.33e-09,250;CL:0000066,3.03e-09,253;CL:1000449,8.27e-08,15;CL:0000222,5.71e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!9.98e-07!16;UBERON:0001285!9.98e-07!16;UBERON:0007684!9.98e-07!16;UBERON:0003220!9.98e-07!16;UBERON:0004208!9.98e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.79e-08;15!UBERON:0004819;7.79e-08;15!UBERON:0001285;7.79e-08;15!UBERON:0007684;7.79e-08;15!UBERON:0000353;9.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,8.27e-08,15;UBERON:0009773,8.27e-08,15;UBERON:0001231,8.27e-08,15;UBERON:0001285,8.27e-08,15;UBERON:0007684,8.27e-08,15;UBERON:0004208,8.27e-08,15;UBERON:0006555,6.75e-07,16;UBERON:0004819,6.75e-07,16;UBERON:0000353,9.84e-07,15 | |||
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| ||
|short_description=p1@MCRS1 | |||
}} | }} |
Latest revision as of 16:37, 18 September 2015
Short description: | p1@MCRS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCRS1_5end |
Coexpression cluster: | C1671_Alveolar_Mesenchymal_Renal_Pericytes_Fibroblast_Placental_Smooth |
Association with transcript: | 0bp_to_ENST00000546244, ENST00000548602, ENST00000549000, ENST00000550165, ENST00000552206, ENST00000553173, NM_006337, uc001ruk.1, uc001rul.1, uc001rum.1, uc001run.1, uc009zlj.1_5end |
EntrezGene: | MCRS1 |
HGNC: | 6960 |
UniProt: | Q7Z372F8VZC2F8W126Q96EZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.33e-09 | 250 |
epithelial cell | 3.03e-09 | 253 |
epithelial cell of nephron | 8.27e-08 | 15 |
mesodermal cell | 5.71e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 8.27e-08 | 15 |
renal tubule | 8.27e-08 | 15 |
nephron tubule | 8.27e-08 | 15 |
nephron | 8.27e-08 | 15 |
uriniferous tubule | 8.27e-08 | 15 |
nephrogenic mesenchyme | 8.27e-08 | 15 |
excretory tube | 6.75e-07 | 16 |
kidney epithelium | 6.75e-07 | 16 |
parenchyma | 9.84e-07 | 15 |