FFCP PHASE1:Hg19::chr8:61880221..61880237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100130298 | |EntrezGene=100130298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=69bp_to_NR_034003_5end | |association_with_transcript=69bp_to_NR_034003_5end | ||
|cluster_id=chr8:61880221..61880237,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_2_at_LOC100130298_5end | |description=CAGE_peak_2_at_LOC100130298_5end | ||
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|ontology_enrichment_celltype=CL:0002274!9.53e-11!5;CL:0000457!9.53e-11!5;CL:0002191!9.53e-11!5;CL:0000097!9.53e-11!5;CL:0000831!9.53e-11!5;CL:0002028!9.53e-11!5 | |ontology_enrichment_celltype=CL:0002274!9.53e-11!5;CL:0000457!9.53e-11!5;CL:0002191!9.53e-11!5;CL:0000097!9.53e-11!5;CL:0000831!9.53e-11!5;CL:0002028!9.53e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.21e-40;1!CL:0000557;2.21e-40;1!CL:0000235;6.78e-08;6 | |ontology_enrichment_celltype_v019=CL:0002032;2.21e-40;1!CL:0000557;2.21e-40;1!CL:0000235;6.78e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p2@LOC100130298 | |short_description=p2@LOC100130298 | ||
}} | }} |
Latest revision as of 17:06, 18 September 2015
Short description: | p2@LOC100130298 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100130298_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 69bp_to_NR_034003_5end |
EntrezGene: | LOC100130298 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |