FFCP PHASE1:Hg19::chr10:62538248..62538260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:62538248..62538260,+
|short_description=p2@CDK1
|description=CAGE_peak_2_at_CDK1_5end
|association_with_transcript=0bp_to_ENST00000448257_5end
|EntrezGen...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=983 | |EntrezGene=983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1722 | |HGNC=1722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000448257_5end | |||
|cluster_id=chr10:62538248..62538260,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_CDK1_5end | |||
|id=chr10:62538248..62538260,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-15!254;CL:0000548!6.18e-15!679;CL:0000004!6.18e-15!679;CL:0000255!6.18e-15!679;CL:0000012!1.33e-14!682;CL:0002319!6.12e-09!25;CL:0000133!1.32e-08!59;CL:0000003!3.67e-08!722;CL:0000333!8.14e-08!41;CL:0002321!1.41e-07!248;CL:0000221!2.45e-07!71;CL:0000220!2.83e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.66e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.78e-15,253;CL:0002319,3.54e-09,25;CL:0000133,1.56e-08,59;CL:0000333,5.48e-08,41;CL:0000221,8.58e-07,72;CL:0000095,8.74e-07,17;CL:0000123,8.74e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.13e-54!235;DOID:14566!5.82e-54!239;DOID:0050686!3.09e-27!137;DOID:0050687!3.14e-27!143;DOID:305!5.38e-23!106;DOID:2531!6.16e-17!51;DOID:0060083!6.16e-17!51;DOID:1240!2.72e-13!39;DOID:8692!1.24e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.31e-11;39!DOID:2531;8.15e-11;51!DOID:0060083;8.15e-11;51!DOID:8692;2.06e-09;31!DOID:305;6.89e-08;106!DOID:0050687;5.50e-07;143!DOID:0050686;7.25e-07;137!DOID:14566;8.93e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.89e-54,235;DOID:14566,3.00e-53,239;DOID:0050687,7.56e-27,143;DOID:0050686,1.05e-26,137;DOID:305,7.15e-23,106;DOID:2531,1.97e-17,51;DOID:0060083,1.97e-17,51;DOID:1240,1.14e-13,39;DOID:8692,6.80e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-07;9!UBERON:0001557;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.90e-07,9 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.140954404095971,0,0,0,0,0.631719873426831,0,4.17747692052565,0,3.71350332621293,2.90143676051299,1.48519623552056,1.32558950291166,0.672325146451775,2.41077811209591,0,0.487932798790507,7.75662665883764,3.87601313364081,2.5076377718247,45.7977579409691,36.1348482192414,31.1345746195111,17.193016293289,19.1294373418374,14.4040729804033,0,0.383829398097213,0.154816123316076,5.51652734687356,1.204823675113,0,16.8103825259255,19.1928463858019,7.34001098337118,0,0,0,0.223915474239924,0,0.515151135268373,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,1.21079900526674,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,1.09227722252426,0,0,1.20118796110804,0.574752439954483,0,0,0,0,0,0,0,11.8522838148785,0.393419540227666,0,0,2.50779743086017,0,0,0,6.90744832688076,0,0.221533894583621,0,8.96639238079726,7.02320476823343,14.1416597959161,10.2249506580764,9.85330491499179,0,0,0,17.1097107473325,0,0,0,0.318565414324097,0,0.950452044448374,0.150575119077773,0,1.24930726552346,0.473554504088034,0.821127996921047,0,0,0,0,6.70700859703636,10.356867509326,18.4333967716129,1.00267582127178,4.20054904986389,5.5670016293577,2.43317435151318,18.4342893469932,7.9822583086523,10.3645047117889,2.5540919722054,1.45718115317017,2.96627554227544,0,0.174129737299267,0,0,0,0,4.57153536943422,3.4409383804245,2.08284300964557,2.82653970962005,2.09749718104953,5.77747888074142,5.22487416342026,2.84258435086262,2.13459757612026,1.33888245105868,4.02829317109147,3.04108842287405,4.39311703586705,5.8826092855339,1.62028389576352,18.0385451133841,9.20570427767296,11.8242054507488,4.5994991239765,0.949265659568129,5.31285057398181,0,0,0,1.49091585508596,12.5364206547934,0.264818361626438,6.3104056564739,9.930714701554,3.92474320099615,2.1349799145941,0.98667019366864,5.91300967259556,7.27437629176316,14.0577236677575,1.81628913173918,0,3.74914290934075,1.87296046098192,3.99330275081114,2.09228152772521,15.0316158264019,12.6260896607143,13.6237282501181,3.0623125688234,18.1794789621417,2.37649296704261,7.12801714369232,2.22540236350701,0.910161361938026,0.718618141816238,20.8736781303042,13.5128001461721,4.98715407871529,5.70670907145089,6.43624371177941,2.10333282469236,23.3670297309643,13.2748330409758,2.13557388818567,2.7551147150743,10.5031883629541,4.43125875725287,4.63752972082133,1.11670113798954,19.4092782077456,5.74878330451072,6.05841058185875,1.28869858099219,0.484938170456436,4.9701342952326,11.1834829032681,7.12154487704048,2.70565194428616,5.18217629122586,3.15485054927904,11.465528376182,12.5903279905411,15.2214065159069,12.4393266018445,18.4194221139209,20.4387321082465,7.8224766164908,1.92972281457866,8.28809528114883,0,0.721879481669586,33.2442108111961,34.2226920858546,35.1876103629884,36.1764230562252,30.9388810611217,38.2005696768866,28.4494060217947,21.5843611637881,29.2407839279257,5.16708818237254,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0,0,57.3902029239046,19.0632079741826,7.3774158428366,0.98775256867763,1.1240175325762,15.5819907238028,6.66636805141413,2.6064664424826,0,8.6598805215164,10.3178060427818,1.29149563659404,5.19719211939866,5.09284063834272,6.46864117597634,12.6432703673484,13.735778593518,1.23108503043699,2.80805118167085,6.09387765383786,2.81201501960331,3.35964256397719,7.3723050566041,31.4350414686998,29.0633938513962,5.75074018747817,7.38994856843915,7.66021375915067,0,0,0,29.3995250572743,2.67391897890794,2.34434894420094,1.71072446022705,12.1336441389922,18.9216126441668,6.5740079505033,4.82163662685051,3.48768055066624,25.5217234656906,0,0,23.668477071568,1.86156681609409,4.16029747645464,8.23063597638855,1.41849132023278,6.66055447540248,2.7165818795048,0,4.11620168390384,21.1728519790928,3.55391948742546,22.9666043150694,0.301439377059586,0,2.49932477955143,0,1.00451418286425,4.21667878966063,4.0736225433569,0,1.42636905040718,4.63300181336253,5.95881335396112,11.6389626105932,10.423918391398,0,0.215627574859517,0.128343036279748,13.4670150837906,7.8083912314573,23.1986643833309,10.7210409813983,16.5864075429822,0,0,0,0.49076596687656,1.00034104211935,1.35632511849868,1.03985430765404,3.56857977594324,1.73472656537328,2.92853537481783,0,0,0,21.255219153134,4.60922921354258,9.20966313361678,0,0.686286847621712,0.413536052245775,0,0.320182673410333,2.72814814301633,3.32870879020994,6.35019615992329,0.496215615637554,1.68808170616869,1.12264037773229,0.128139149255701,0.511707249066704,0,0,15.7293887678709,8.87808626565635,13.0582178061957,7.2695620085707,7.78609535681727,27.3142356077066,1.80455823272956,0,20.3221573251354,16.9344786246247,1.04899531967539,0.902399225814824,9.3958711267386,3.13739907670742,2.92278449306521,8.54968194032293,2.27466768141793,2.72149928442425,11.0117117212091,0,1.35473218771926,0,6.626783099171,2.49322802678617,4.02974558499921,112.261056842719,113.724421195832,20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| ||
|short_description=p2@CDK1 | |||
}} | }} |
Latest revision as of 17:08, 18 September 2015
Short description: | p2@CDK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000448257_5end |
EntrezGene: | CDK1 |
HGNC: | 1722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.78e-15 | 253 |
neural cell | 3.54e-09 | 25 |
neurectodermal cell | 1.56e-08 | 59 |
migratory neural crest cell | 5.48e-08 | 41 |
ectodermal cell | 8.58e-07 | 72 |
neuron associated cell | 8.74e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.74e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.89e-54 | 235 |
disease of cellular proliferation | 3.00e-53 | 239 |
cell type cancer | 7.56e-27 | 143 |
organ system cancer | 1.05e-26 | 137 |
carcinoma | 7.15e-23 | 106 |
hematologic cancer | 1.97e-17 | 51 |
immune system cancer | 1.97e-17 | 51 |
leukemia | 1.14e-13 | 39 |
myeloid leukemia | 6.80e-10 | 31 |