FFCP PHASE1:Hg19::chr10:62538248..62538260,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:62538248..62538260,+ to FFCP PHASE1:Hg19::chr10:62538248..62538260,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=983 | |EntrezGene=983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1722 | |HGNC=1722 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000448257_5end | |||
|cluster_id=chr10:62538248..62538260,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_CDK1_5end | |||
|id=chr10:62538248..62538260,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-15!254;CL:0000548!6.18e-15!679;CL:0000004!6.18e-15!679;CL:0000255!6.18e-15!679;CL:0000012!1.33e-14!682;CL:0002319!6.12e-09!25;CL:0000133!1.32e-08!59;CL:0000003!3.67e-08!722;CL:0000333!8.14e-08!41;CL:0002321!1.41e-07!248;CL:0000221!2.45e-07!71;CL:0000220!2.83e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.66e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.78e-15,253;CL:0002319,3.54e-09,25;CL:0000133,1.56e-08,59;CL:0000333,5.48e-08,41;CL:0000221,8.58e-07,72;CL:0000095,8.74e-07,17;CL:0000123,8.74e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.13e-54!235;DOID:14566!5.82e-54!239;DOID:0050686!3.09e-27!137;DOID:0050687!3.14e-27!143;DOID:305!5.38e-23!106;DOID:2531!6.16e-17!51;DOID:0060083!6.16e-17!51;DOID:1240!2.72e-13!39;DOID:8692!1.24e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.31e-11;39!DOID:2531;8.15e-11;51!DOID:0060083;8.15e-11;51!DOID:8692;2.06e-09;31!DOID:305;6.89e-08;106!DOID:0050687;5.50e-07;143!DOID:0050686;7.25e-07;137!DOID:14566;8.93e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.89e-54,235;DOID:14566,3.00e-53,239;DOID:0050687,7.56e-27,143;DOID:0050686,1.05e-26,137;DOID:305,7.15e-23,106;DOID:2531,1.97e-17,51;DOID:0060083,1.97e-17,51;DOID:1240,1.14e-13,39;DOID:8692,6.80e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-07;9!UBERON:0001557;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.90e-07,9 | |||
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| ||
|short_description=p2@CDK1 | |||
}} | }} |
Latest revision as of 17:08, 18 September 2015
Short description: | p2@CDK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDK1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000448257_5end |
EntrezGene: | CDK1 |
HGNC: | 1722 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.78e-15 | 253 |
neural cell | 3.54e-09 | 25 |
neurectodermal cell | 1.56e-08 | 59 |
migratory neural crest cell | 5.48e-08 | 41 |
ectodermal cell | 8.58e-07 | 72 |
neuron associated cell | 8.74e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.74e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.89e-54 | 235 |
disease of cellular proliferation | 3.00e-53 | 239 |
cell type cancer | 7.56e-27 | 143 |
organ system cancer | 1.05e-26 | 137 |
carcinoma | 7.15e-23 | 106 |
hematologic cancer | 1.97e-17 | 51 |
immune system cancer | 1.97e-17 | 51 |
leukemia | 1.14e-13 | 39 |
myeloid leukemia | 6.80e-10 | 31 |