FFCP PHASE1:Hg19::chr5:74807418..74807466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10087 | |EntrezGene=10087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2205 | |HGNC=2205 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5P4 | |UniProt=Q9Y5P4 | ||
|association_with_transcript=0bp_to_ENST00000261415,ENST00000405807,NM_005713,NM_031361,uc003kds.2,uc003kdu.2,uc011csu.1_5end | |association_with_transcript=0bp_to_ENST00000261415,ENST00000405807,NM_005713,NM_031361,uc003kds.2,uc003kdu.2,uc011csu.1_5end | ||
|cluster_id=chr5:74807418..74807466,- | |||
|description=CAGE_peak_1_at_COL4A3BP_5end | |description=CAGE_peak_1_at_COL4A3BP_5end | ||
|id=chr5:74807418..74807466,- | |id=chr5:74807418..74807466,- | ||
|ontology_enrichment_celltype=CL:0000766!5.54e-30!76;CL:0000557!5.58e-27!71;CL:0000839!2.60e-25!70;CL:0002057!1.17e-23!42;CL:0002009!1.71e-23!65;CL:0002194!3.76e-23!63;CL:0000576!3.76e-23!63;CL:0000040!3.76e-23!63;CL:0000559!3.76e-23!63;CL:0000738!5.82e-23!140;CL:0000860!6.28e-21!45;CL:0000763!3.15e-18!112;CL:0000049!3.15e-18!112;CL:0002031!3.26e-18!124;CL:0002087!1.07e-16!119;CL:0000037!4.13e-16!172;CL:0000566!4.13e-16!172;CL:0002032!6.01e-15!165;CL:0000837!6.01e-15!165;CL:0000988!1.57e-14!182 | |ontology_enrichment_celltype=CL:0000766!5.54e-30!76;CL:0000557!5.58e-27!71;CL:0000839!2.60e-25!70;CL:0002057!1.17e-23!42;CL:0002009!1.71e-23!65;CL:0002194!3.76e-23!63;CL:0000576!3.76e-23!63;CL:0000040!3.76e-23!63;CL:0000559!3.76e-23!63;CL:0000738!5.82e-23!140;CL:0000860!6.28e-21!45;CL:0000763!3.15e-18!112;CL:0000049!3.15e-18!112;CL:0002031!3.26e-18!124;CL:0002087!1.07e-16!119;CL:0000037!4.13e-16!172;CL:0000566!4.13e-16!172;CL:0002032!6.01e-15!165;CL:0000837!6.01e-15!165;CL:0000988!1.57e-14!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.62e-17;33!CL:0002057;1.62e-17;33!CL:0000473;1.65e-17;39!CL:0000234;1.65e-17;39!CL:0000576;2.08e-15;48!CL:0000766;7.06e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.86e-33,72;CL:0000557,3.50e-30,67;CL:0000839,2.13e-28,66;CL:0000473,5.79e-27,48;CL:0000234,5.79e-27,48;CL:0002009,1.38e-26,61;CL:0002194,2.77e-26,59;CL:0000576,2.77e-26,59;CL:0000040,2.77e-26,59;CL:0000559,2.77e-26,59;CL:0000738,1.07e-24,136;CL:0000860,1.17e-23,42;CL:0002057,1.17e-23,42;CL:0000763,5.98e-20,108;CL:0000049,5.98e-20,108;CL:0002031,8.09e-20,120;CL:0002087,2.99e-18,115;CL:0000037,2.65e-17,168;CL:0002032,4.11e-16,161;CL:0000837,4.11e-16,161;CL:0000988,4.75e-16,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.69e-28!102;UBERON:0003061!8.69e-28!102;UBERON:0002193!3.74e-26!112;UBERON:0002371!4.79e-22!80;UBERON:0001474!5.20e-19!86;UBERON:0007023!1.98e-18!115;UBERON:0002405!2.62e-17!115;UBERON:0004765!1.44e-14!101;UBERON:0001434!1.44e-14!101;UBERON:0003080!4.79e-07!42;UBERON:0000178!6.73e-07!15;UBERON:0000179!6.73e-07!15;UBERON:0000463!6.73e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!8.69e-28!102;UBERON:0003061!8.69e-28!102;UBERON:0002193!3.74e-26!112;UBERON:0002371!4.79e-22!80;UBERON:0001474!5.20e-19!86;UBERON:0007023!1.98e-18!115;UBERON:0002405!2.62e-17!115;UBERON:0004765!1.44e-14!101;UBERON:0001434!1.44e-14!101;UBERON:0003080!4.79e-07!42;UBERON:0000178!6.73e-07!15;UBERON:0000179!6.73e-07!15;UBERON:0000463!6.73e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.35e-07;15!UBERON:0000179;7.35e-07;15!UBERON:0000463;7.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.85e-30,98;UBERON:0003061,2.85e-30,98;UBERON:0002193,2.25e-28,108;UBERON:0002371,1.46e-24,76;UBERON:0002405,1.62e-22,93;UBERON:0001474,3.77e-21,82;UBERON:0007023,4.18e-18,114;UBERON:0004765,5.05e-18,90;UBERON:0001434,1.48e-15,100;UBERON:0000178,6.73e-07,15;UBERON:0000179,6.73e-07,15;UBERON:0000463,6.73e-07,15 | |||
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| ||
|short_description=p1@COL4A3BP | |short_description=p1@COL4A3BP | ||
}} | }} |
Latest revision as of 17:31, 18 September 2015
Short description: | p1@COL4A3BP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL4A3BP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261415, ENST00000405807, NM_005713, NM_031361, uc003kds.2, uc003kdu.2, uc011csu.1_5end |
EntrezGene: | COL4A3BP |
HGNC: | 2205 |
UniProt: | Q9Y5P4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.86e-33 | 72 |
granulocyte monocyte progenitor cell | 3.50e-30 | 67 |
myeloid lineage restricted progenitor cell | 2.13e-28 | 66 |
defensive cell | 5.79e-27 | 48 |
phagocyte | 5.79e-27 | 48 |
macrophage dendritic cell progenitor | 1.38e-26 | 61 |
monopoietic cell | 2.77e-26 | 59 |
monocyte | 2.77e-26 | 59 |
monoblast | 2.77e-26 | 59 |
promonocyte | 2.77e-26 | 59 |
leukocyte | 1.07e-24 | 136 |
classical monocyte | 1.17e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-23 | 42 |
myeloid cell | 5.98e-20 | 108 |
common myeloid progenitor | 5.98e-20 | 108 |
hematopoietic lineage restricted progenitor cell | 8.09e-20 | 120 |
nongranular leukocyte | 2.99e-18 | 115 |
hematopoietic stem cell | 2.65e-17 | 168 |
hematopoietic oligopotent progenitor cell | 4.11e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.11e-16 | 161 |
hematopoietic cell | 4.75e-16 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.85e-30 | 98 |
blood island | 2.85e-30 | 98 |
hemolymphoid system | 2.25e-28 | 108 |
bone marrow | 1.46e-24 | 76 |
immune system | 1.62e-22 | 93 |
bone element | 3.77e-21 | 82 |
adult organism | 4.18e-18 | 114 |
skeletal element | 5.05e-18 | 90 |
skeletal system | 1.48e-15 | 100 |
blood | 6.73e-07 | 15 |
haemolymphatic fluid | 6.73e-07 | 15 |
organism substance | 6.73e-07 | 15 |