FFCP PHASE1:Hg19::chr1:17349654..17349690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6390 | |EntrezGene=6390 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10681 | |HGNC=10681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000475049_5end | |association_with_transcript=0bp_to_ENST00000475049_5end | ||
|cluster_id=chr1:17349654..17349690,- | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_6_at_SDHB_5end | |description=CAGE_peak_6_at_SDHB_5end | ||
|id=chr1:17349654..17349690,- | |id=chr1:17349654..17349690,- | ||
|ontology_enrichment_celltype=CL:0000946!5.56e-16!1;CL:0000786!5.56e-16!1;CL:0000980!5.56e-16!1;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2 | |ontology_enrichment_celltype=CL:0000946!5.56e-16!1;CL:0000786!5.56e-16!1;CL:0000980!5.56e-16!1;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;5.42e-195;1!CL:0000786;5.42e-195;1!CL:0000945;1.01e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,5.42e-195,1;CL:0000786,5.42e-195,1;CL:0000980,5.42e-195,1;CL:0000785,1.55e-98,2;CL:0000955,1.55e-98,2;CL:0000818,1.55e-98,2;CL:0000954,1.55e-98,2;CL:0000816,1.55e-98,2;CL:0000817,2.39e-66,3;CL:0000236,1.43e-15,14;CL:0000945,1.01e-09,24;CL:0000826,1.01e-09,24;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000954;1.55e-98;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.16e-20!3;UBERON:0004854!7.16e-20!3;UBERON:0009034!7.16e-20!3;UBERON:0002095!7.16e-20!3;UBERON:0004782!7.16e-20!3;UBERON:0003281!7.16e-20!3;UBERON:0009664!7.16e-20!3;UBERON:0002296!7.16e-20!3;UBERON:0005602!7.16e-20!3;UBERON:0001179!7.16e-20!3;UBERON:0006293!7.16e-20!3;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0004177!4.57e-09!7;UBERON:0000945!4.83e-08!8;UBERON:0010039!4.83e-08!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@SDHB | |short_description=p6@SDHB | ||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p6@SDHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SDHB_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | 0bp_to_ENST00000475049_5end |
EntrezGene: | SDHB |
HGNC: | 10681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 5.42e-195 | 1 |
plasma cell | 5.42e-195 | 1 |
plasmablast | 5.42e-195 | 1 |
mature B cell | 1.55e-98 | 2 |
pre-B-II cell | 1.55e-98 | 2 |
transitional stage B cell | 1.55e-98 | 2 |
small pre-B-II cell | 1.55e-98 | 2 |
immature B cell | 1.55e-98 | 2 |
precursor B cell | 2.39e-66 | 3 |
B cell | 1.43e-15 | 14 |
lymphocyte of B lineage | 1.01e-09 | 24 |
pro-B cell | 1.01e-09 | 24 |
secretory cell | 5.81e-07 | 36 |