FFCP PHASE1:Hg19::chr12:50497759..50497770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2819 | |EntrezGene=2819 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4455 | |HGNC=4455 | ||
|TSSclassifier=strong | |||
|UniProt=F8VSE8 | |UniProt=F8VSE8 | ||
|association_with_transcript=0bp_to_ENST00000547964_5end | |association_with_transcript=0bp_to_ENST00000547964_5end | ||
|cluster_id=chr12:50497759..50497770,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_GPD1_5end | |description=CAGE_peak_3_at_GPD1_5end | ||
|id=chr12:50497759..50497770,+ | |id=chr12:50497759..50497770,+ | ||
|ontology_enrichment_celltype=CL:0000136!3.80e-09!15 | |ontology_enrichment_celltype=CL:0000136!3.80e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.02e-19;13!CL:0002521;4.75e-09;3!CL:0000182;2.93e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.45e-16,15;CL:0002521,4.82e-09,3;CL:0000182,3.01e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.07e-07;3!UBERON:0003057;1.07e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.68e-45!115;UBERON:0005743!1.34e-27!86;UBERON:0000073!1.37e-27!94;UBERON:0001016!1.37e-27!94;UBERON:0001017!3.09e-26!82;UBERON:0001049!2.56e-25!57;UBERON:0005068!2.56e-25!57;UBERON:0006241!2.56e-25!57;UBERON:0007135!2.56e-25!57;UBERON:0002346!7.08e-23!90;UBERON:0003075!7.71e-23!86;UBERON:0007284!7.71e-23!86;UBERON:0000955!3.79e-22!69;UBERON:0006238!3.79e-22!69;UBERON:0002616!1.41e-19!59;UBERON:0003080!5.04e-19!42;UBERON:0002780!4.49e-18!41;UBERON:0001890!4.49e-18!41;UBERON:0006240!4.49e-18!41;UBERON:0000924!6.73e-18!173;UBERON:0006601!6.73e-18!173;UBERON:0004121!1.34e-17!169;UBERON:0000153!7.71e-17!129;UBERON:0007811!7.71e-17!129;UBERON:0000033!4.10e-16!123;UBERON:0003056!4.63e-16!61;UBERON:0001893!1.38e-15!34;UBERON:0002020!1.51e-15!34;UBERON:0003528!1.51e-15!34;UBERON:0002791!7.91e-15!33;UBERON:0001869!4.53e-14!32;UBERON:0002619!1.24e-12!22;UBERON:0001950!6.51e-11!20;UBERON:0000956!1.69e-10!25;UBERON:0000203!1.69e-10!25;UBERON:0000475!1.32e-09!365;UBERON:0002298!8.52e-09!8;UBERON:0000922!2.21e-08!612;UBERON:0000025!3.49e-08!194;UBERON:0000923!1.57e-07!604;UBERON:0005291!1.57e-07!604;UBERON:0006598!1.57e-07!604;UBERON:0002532!1.57e-07!604;UBERON:0003076!1.77e-07!15;UBERON:0003057!1.77e-07!15;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0000468!2.45e-07!659;UBERON:0000062!3.09e-07!511;UBERON:0000481!7.49e-07!347;UBERON:0002420!7.56e-07!9;UBERON:0007245!7.56e-07!9;UBERON:0010009!7.56e-07!9;UBERON:0010011!7.56e-07!9;UBERON:0000454!7.56e-07!9;UBERON:0002308!9.86e-07!9;UBERON:0000125!9.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.52e-10;114!UBERON:0002190;4.75e-09;3!UBERON:0002240;1.07e-07;3!UBERON:0005174;1.07e-07;3!UBERON:0001137;1.07e-07;3!UBERON:0000349;1.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.48e-30,114;UBERON:0001049,1.21e-09,56;UBERON:0005068,1.21e-09,56;UBERON:0006241,1.21e-09,56;UBERON:0007135,1.21e-09,56;UBERON:0001017,1.39e-09,81;UBERON:0001016,4.20e-09,89;UBERON:0002190,4.82e-09,3;UBERON:0011216,5.21e-09,223;UBERON:0002240,1.03e-07,3;UBERON:0005174,1.03e-07,3;UBERON:0001137,1.03e-07,3;UBERON:0000349,1.85e-07,5;UBERON:0000955,4.16e-07,68;UBERON:0006238,4.16e-07,68;UBERON:0000073,5.93e-07,53;UBERON:0002616,5.93e-07,53;UBERON:0003075,6.23e-07,82;UBERON:0007284,6.23e-07,82 | |||
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| ||
|short_description=p3@GPD1 | |short_description=p3@GPD1 | ||
}} | }} |
Latest revision as of 18:14, 18 September 2015
Short description: | p3@GPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPD1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000547964_5end |
EntrezGene: | GPD1 |
HGNC: | 4455 |
UniProt: | F8VSE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.45e-16 | 15 |
subcutaneous fat cell | 4.82e-09 | 3 |
hepatocyte | 3.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.48e-30 | 114 |
neural tube | 1.21e-09 | 56 |
neural rod | 1.21e-09 | 56 |
future spinal cord | 1.21e-09 | 56 |
neural keel | 1.21e-09 | 56 |
central nervous system | 1.39e-09 | 81 |
nervous system | 4.20e-09 | 89 |
subcutaneous adipose tissue | 4.82e-09 | 3 |
organ system subdivision | 5.21e-09 | 223 |
spinal cord | 1.03e-07 | 3 |
dorsal region element | 1.03e-07 | 3 |
dorsum | 1.03e-07 | 3 |
limbic system | 1.85e-07 | 5 |
brain | 4.16e-07 | 68 |
future brain | 4.16e-07 | 68 |
regional part of nervous system | 5.93e-07 | 53 |
regional part of brain | 5.93e-07 | 53 |
neural plate | 6.23e-07 | 82 |
presumptive neural plate | 6.23e-07 | 82 |