FFCP PHASE1:Hg19::chr10:63816978..63816993,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=17362 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q14865 | ||
|association_with_transcript=45bp_to_M73837_5end | |association_with_transcript=45bp_to_M73837_5end | ||
|cluster_id=chr10:63816978..63816993,+ | |cluster_id=chr10:63816978..63816993,+ | ||
Latest revision as of 18:33, 18 September 2015
| Short description: | p12@ARID5B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_ARID5B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 45bp_to_M73837_5end |
| EntrezGene: | ARID5B |
| HGNC: | 17362 |
| UniProt: | Q14865 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p12@ARID5B |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| prostate stromal cell | 8.30e-10 | 3 |
| stromal cell | 2.39e-09 | 28 |
| smooth muscle cell of prostate | 1.17e-07 | 2 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| prostate gland | 5.72e-07 | 11 |
| male accessory sex gland | 5.72e-07 | 11 |
| embryonic cloacal epithelium | 5.72e-07 | 11 |
| epithelium of hindgut | 5.72e-07 | 11 |
| urogenital sinus epithelium | 5.72e-07 | 11 |
| prostate bud | 5.72e-07 | 11 |
| prostate field | 5.72e-07 | 11 |
Showing 1 to 7 of 7 entries
