FFCP PHASE1:Hg19::chr1:174244231..174244244,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000367690_5end | |association_with_transcript=0bp_to_ENST00000367690_5end | ||
|cluster_id=chr1:174244231..174244244,+ | |||
|coexpression_cluster_id=C210 | |coexpression_cluster_id=C210 | ||
|description=CAGE_peak_14_at_RABGAP1L_5end | |description=CAGE_peak_14_at_RABGAP1L_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.58e-17!24;CL:0000826!1.58e-17!24;CL:0000817!1.08e-16!3;CL:0000236!8.82e-14!14;CL:0000946!6.82e-13!1;CL:0000786!6.82e-13!1;CL:0000980!6.82e-13!1;CL:0000838!1.41e-10!52;CL:0000542!2.29e-10!53;CL:0000051!2.29e-10!53;CL:0000785!4.42e-07!2;CL:0000955!4.42e-07!2;CL:0000818!4.42e-07!2;CL:0000954!4.42e-07!2;CL:0000816!4.42e-07!2 | |ontology_enrichment_celltype=CL:0000945!1.58e-17!24;CL:0000826!1.58e-17!24;CL:0000817!1.08e-16!3;CL:0000236!8.82e-14!14;CL:0000946!6.82e-13!1;CL:0000786!6.82e-13!1;CL:0000980!6.82e-13!1;CL:0000838!1.41e-10!52;CL:0000542!2.29e-10!53;CL:0000051!2.29e-10!53;CL:0000785!4.42e-07!2;CL:0000955!4.42e-07!2;CL:0000818!4.42e-07!2;CL:0000954!4.42e-07!2;CL:0000816!4.42e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.48e-40;1!CL:0000945;1.02e-15;24!CL:0000542;3.32e-07;53 | |ontology_enrichment_celltype_v019=CL:0000817;1.48e-40;1!CL:0000945;1.02e-15;24!CL:0000542;3.32e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000817,1.60e-14,3;CL:0000838,1.10e-07,52;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.21e-40;1!CL:0000051;3.32e-07;53 | |ontology_enrichment_development_v019=UBERON:0001045;2.21e-40;1!CL:0000051;3.32e-07;53 | ||
|ontology_enrichment_disease=DOID:9119!4.23e-13!1;DOID:0060058!2.65e-11!10 | |ontology_enrichment_disease=DOID:9119!4.23e-13!1;DOID:0060058!2.65e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.90e-17;10 | |ontology_enrichment_disease_v019=DOID:0060058;5.90e-17;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.90e-17,10;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001154!2.32e-13!1;UBERON:0001153!2.32e-13!1;UBERON:0002372!2.62e-13!1;UBERON:0001961!2.62e-13!1;UBERON:0001744!2.62e-13!1;UBERON:0001735!2.62e-13!1;UBERON:0000341!4.17e-07!2 | |ontology_enrichment_uberon=UBERON:0001154!2.32e-13!1;UBERON:0001153!2.32e-13!1;UBERON:0002372!2.62e-13!1;UBERON:0001961!2.62e-13!1;UBERON:0001744!2.62e-13!1;UBERON:0001735!2.62e-13!1;UBERON:0000341!4.17e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.21e-40;1!UBERON:0001153;2.21e-40;1!UBERON:0009854;2.21e-40;1!UBERON:0002372;3.30e-40;1!UBERON:0001961;3.30e-40;1!UBERON:0001744;3.30e-40;1!UBERON:0001042;3.30e-40;1!UBERON:0001735;3.30e-40;1!UBERON:0006562;6.96e-21;2!UBERON:0009856;3.42e-11;4!UBERON:0004907;3.22e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0001154;2.21e-40;1!UBERON:0001153;2.21e-40;1!UBERON:0009854;2.21e-40;1!UBERON:0002372;3.30e-40;1!UBERON:0001961;3.30e-40;1!UBERON:0001744;3.30e-40;1!UBERON:0001042;3.30e-40;1!UBERON:0001735;3.30e-40;1!UBERON:0006562;6.96e-21;2!UBERON:0009856;3.42e-11;4!UBERON:0004907;3.22e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,2.21e-40,1;UBERON:0001153,2.21e-40,1;UBERON:0001045,2.21e-40,1;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0004907,3.22e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.1297223126104,113.166709059988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3518435205138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07824614168525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,2.42467390852515,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.1297223126104,113.166709059988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3518435205138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07824614168525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,2.42467390852515,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@RABGAP1L | |short_description=p14@RABGAP1L | ||
}} | }} |
Latest revision as of 18:51, 18 September 2015
Short description: | p14@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RABGAP1L_5end |
Coexpression cluster: | C210_Burkitt_lymphoma_appendix_acute_diffuse_CD19_tonsil |
Association with transcript: | 0bp_to_ENST00000367690_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
precursor B cell | 1.60e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 2.21e-40 | 1 |
caecum | 2.21e-40 | 1 |
midgut | 2.21e-40 | 1 |
tonsil | 3.30e-40 | 1 |
mucosa-associated lymphoid tissue | 3.30e-40 | 1 |
lymphoid tissue | 3.30e-40 | 1 |
tonsillar ring | 3.30e-40 | 1 |
lower digestive tract | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.90e-17 | 10 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |