FFCP PHASE1:Hg19::chr10:64028466..64028509,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:64028466..64028509,- to FFCP PHASE1:Hg19::chr10:64028466..64028509,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219790 | |EntrezGene=219790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19364 | |HGNC=19364 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZC4 | |UniProt=Q8IZC4 | ||
|association_with_transcript=0bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | |||
|cluster_id=chr10:64028466..64028509,- | |||
|coexpression_cluster_id=C3033 | |||
|description=CAGE_peak_2_at_RTKN2_5end | |||
|id=chr10:64028466..64028509,- | |||
|ontology_enrichment_celltype=CL:0002319!1.45e-08!25;CL:0000066!2.83e-08!254;CL:0000133!3.25e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.25e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.66e-10,59;CL:0002319,3.17e-10,25;CL:0000066,2.86e-08,253;CL:0000221,9.35e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.95e-30!235;DOID:14566!2.05e-28!239;DOID:0050687!5.23e-26!143;DOID:305!3.24e-19!106;DOID:3095!5.04e-10!22;DOID:2994!5.04e-10!22;DOID:0050686!1.03e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.17e-11;22!DOID:2994;4.17e-11;22!DOID:3119;2.28e-07;14!DOID:171;2.48e-07;10!DOID:0050687;6.62e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.98e-30,235;DOID:14566,1.56e-28,239;DOID:0050687,1.17e-25,143;DOID:305,1.67e-17,106;DOID:3095,4.65e-11,22;DOID:2994,4.65e-11,22;DOID:0050686,2.30e-10,137;DOID:3119,1.89e-07,14;DOID:171,3.82e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001869!9.19e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.98e-08,223 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,1.96993692922861,1.22400414746552,0.313454721478088,7.15589967827642,7.39121895393575,11.0477522843426,0,0,0,0,0,0,0.919421224478927,0,0,1.47187681102573,0,1.46800219667424,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,1.32171328579026,0.560508562981536,1.31692042387539,0,0,0.205601498999509,0.668745981562712,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,0.144846518960824,0,0,3.78139268656271,3.1042115644759,2.98638271356629,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0,0,0,1.16089646769304,0.44905874525234,1.57656072676651,0,0,0.366403487860815,0,0,0,1.49091585508596,2.27934920996244,0.662045904066094,1.72101972449288,2.4826786753885,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0,0.822041490506354,0.971237666208789,0.280901613404497,0,1.22834317311768,0,1.18800285728205,0.247266929278557,0,0,2.02003336744879,2.50237039743928,1.10825646193673,0.438977620880838,1.83892677479412,0.45071417671979,1.02088964844019,0,0,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0,0.323292113637624,0,0.503760491138201,0.67824236924195,0,0,0,4.02513230227665,7.1566074893602,3.95059405756363,3.31715376049185,7.82194637714448,6.93456982244077,0,0.643240938192885,0,0,0,2.01121560067735,2.86593973132773,0.964044119533928,1.7647035637183,1.96091499683166,2.84724742933316,1.61797569792197,0.98110732562673,1.53898862778556,0,0,0.8231480226628,0,0,0,0,2.6487785964879,9.1011444521904,0,0.329250856225877,0,1.20634766893957,0,0.325808305310325,0,4.3299402607582,2.78232971940184,0.70445216541493,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0.447792613514241,0.581267877027924,3.83382679165211,0,0.176096868026452,0.207328115540772,0,0,3.04789892602411,0.763976851116555,0,0,3.80461723002297,2.70308752059526,0.285826432630578,1.00917975910825,0.87192013766656,1.9067954313447,0.775630294546667,0,0,3.19125739901845,4.16029747645464,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.499864955910285,0,0,0,0.718874566474748,0,2.85273810081437,0.434343920002738,0.205476322550383,0.716243852959582,0.672510863961164,0,0,0,3.04913549066956,3.90419561572865,3.09315525111078,2.51274398001523,3.82763250991898,0,0,0,0,0,0.813795071099207,1.24782516918484,1.24900292158013,1.10391690523754,2.81139395982512,0,0,0,1.32845119707087,1.10621501125022,1.56390506042549,0.195801157462741,1.02943027143257,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.384417447767103,0,0.482561763430822,0,1.85051632563187,1.06537035187876,1.8067974323038,1.55776328755086,1.39452454151951,11.4816477112041,0.200506470303285,0.460404944679482,1.37777337797528,3.64182336013434,1.44236856455367,1.35359883872224,3.23464415838542,7.0591479225917,4.38417673959782,4.3276167846079,0,0.340187410553031,0.431831832204279,1.54227252690289,2.70946437543853,1.50506932156456,3.82314409567557,0.831076008928724,3.1342465661105,0,0,3.07740150139667,2.29610251989794,0.976135183992909,0.618246069886334,6.22672360764735,6.02319349420292,0,0.650060246036521,0,1.06337790121334,0.462145851343933,0.614014698904518,1.24052915236078,0.429680979473094,0.725083469571143,0.852266274161009,1.51354460599453,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,0.464845549297286,0.31481234683064,0,0.308033580176089,0.532306030317022,1.73986598415015,0.18532421910392,0.572499546967965,0.372158369359667,1.58189712359363,0,0,0,0,0,1.2591072030832,0.54907405947211,0.471249609382746,0.404364963146632,0,1.68503382495592,1.46290121726877,2.68084838594413,0,2.18399858252777,1.1312434556297,0,0,0,0.438450885253763,0,0,1.01455188481352,0.30982349809975,1.40847801266121,1.29070216983646,0.0982490410131212,0.35667105148125,2.48332744849418,0.422215270595328,0.987884678879706,0.75894634753143,0.699869440489966,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0.540031437238115,0,2.56377770705936,11.5497582631603,4.90080431962063,9.29015875628594,2.8853842595289,10.6712765022621,12.1163967273905,0.59873811429845,0,2.11673582723883,1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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0.218441372130172,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,1.96993692922861,1.22400414746552,0.313454721478088,7.15589967827642,7.39121895393575,11.0477522843426,0,0,0,0,0,0,0.919421224478927,0,0,1.47187681102573,0,1.46800219667424,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0.512321413058201,0,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0,1.32171328579026,0.560508562981536,1.31692042387539,0,0,0.205601498999509,0.668745981562712,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,0.144846518960824,0,0,3.78139268656271,3.1042115644759,2.98638271356629,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0,0,0,1.16089646769304,0.44905874525234,1.57656072676651,0,0,0.366403487860815,0,0,0,1.49091585508596,2.27934920996244,0.662045904066094,1.72101972449288,2.4826786753885,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0.468642863667593,0,0,0,0.822041490506354,0.971237666208789,0.280901613404497,0,1.22834317311768,0,1.18800285728205,0.247266929278557,0,0,2.02003336744879,2.50237039743928,1.10825646193673,0.438977620880838,1.83892677479412,0.45071417671979,1.02088964844019,0,0,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0.337552664482532,0.0974370051611986,0,0,0.323292113637624,0,0.503760491138201,0.67824236924195,0,0,0,4.02513230227665,7.1566074893602,3.95059405756363,3.31715376049185,7.82194637714448,6.93456982244077,0,0.643240938192885,0,0,0,2.01121560067735,2.86593973132773,0.964044119533928,1.7647035637183,1.96091499683166,2.84724742933316,1.61797569792197,0.98110732562673,1.53898862778556,0,0,0.8231480226628,0,0,0,0,2.6487785964879,9.1011444521904,0,0.329250856225877,0,1.20634766893957,0,0.325808305310325,0,4.3299402607582,2.78232971940184,0.70445216541493,0,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0.447792613514241,0.581267877027924,3.83382679165211,0,0.176096868026452,0.207328115540772,0,0,3.04789892602411,0.763976851116555,0,0,3.80461723002297,2.70308752059526,0.285826432630578,1.00917975910825,0.87192013766656,1.9067954313447,0.775630294546667,0,0,3.19125739901845,4.16029747645464,0.771622122786426,1.41849132023278,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.499864955910285,0,0,0,0.718874566474748,0,2.85273810081437,0.434343920002738,0.205476322550383,0.716243852959582,0.672510863961164,0,0,0,3.04913549066956,3.90419561572865,3.09315525111078,2.51274398001523,3.82763250991898,0,0,0,0,0,0.813795071099207,1.24782516918484,1.24900292158013,1.10391690523754,2.81139395982512,0,0,0,1.32845119707087,1.10621501125022,1.56390506042549,0.195801157462741,1.02943027143257,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0.384417447767103,0,0.482561763430822,0,1.85051632563187,1.06537035187876,1.8067974323038,1.55776328755086,1.39452454151951,11.4816477112041,0.200506470303285,0.460404944679482,1.37777337797528,3.64182336013434,1.44236856455367,1.35359883872224,3.23464415838542,7.0591479225917,4.38417673959782,4.3276167846079,0,0.340187410553031,0.431831832204279,1.54227252690289,2.70946437543853,1.50506932156456,3.82314409567557,0.831076008928724,3.1342465661105,0,0,3.07740150139667,2.29610251989794,0.976135183992909,0.618246069886334,6.22672360764735,6.02319349420292,0,0.650060246036521,0,1.06337790121334,0.462145851343933,0.614014698904518,1.24052915236078,0.429680979473094,0.725083469571143,0.852266274161009,1.51354460599453,0.165284915360978,0.192190067365106,0.127612712494584,0.4046311234222,0.464845549297286,0.31481234683064,0,0.308033580176089,0.532306030317022,1.73986598415015,0.18532421910392,0.572499546967965,0.372158369359667,1.58189712359363,0,0,0,0,0,1.2591072030832,0.54907405947211,0.471249609382746,0.404364963146632,0,1.68503382495592,1.46290121726877,2.68084838594413,0,2.18399858252777,1.1312434556297,0,0,0,0.438450885253763,0,0,1.01455188481352,0.30982349809975,1.40847801266121,1.29070216983646,0.0982490410131212,0.35667105148125,2.48332744849418,0.422215270595328,0.987884678879706,0.75894634753143,0.699869440489966,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0.540031437238115,0,2.56377770705936,11.5497582631603,4.90080431962063,9.29015875628594,2.8853842595289,10.6712765022621,12.1163967273905,0.59873811429845,0,2.11673582723883,1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| ||
|short_description=p2@RTKN2 | |||
}} | }} |
Latest revision as of 19:00, 18 September 2015
Short description: | p2@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTKN2_5end |
Coexpression cluster: | C3033_non_colon_hepatoblastoma_astrocytoma_prostate_rhabdomyosarcoma_acute |
Association with transcript: | 0bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.66e-10 | 59 |
neural cell | 3.17e-10 | 25 |
epithelial cell | 2.86e-08 | 253 |
ectodermal cell | 9.35e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.98e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.98e-30 | 235 |
disease of cellular proliferation | 1.56e-28 | 239 |
cell type cancer | 1.17e-25 | 143 |
carcinoma | 1.67e-17 | 106 |
germ cell and embryonal cancer | 4.65e-11 | 22 |
germ cell cancer | 4.65e-11 | 22 |
organ system cancer | 2.30e-10 | 137 |
gastrointestinal system cancer | 1.89e-07 | 14 |
neuroectodermal tumor | 3.82e-07 | 10 |