FFCP PHASE1:Hg19::chr3:50294928..50294962,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:50294928..50294962,+ to FFCP PHASE1:Hg19::chr3:50294928..50294962,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q6Q795 | |UniProt=Q6Q795 | ||
|association_with_transcript=-368bp_to_AY555145_5end | |||
|cluster_id=chr3:50294928..50294962,+ | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_1_at_AY555145_5end | |||
|id=chr3:50294928..50294962,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-20!42;CL:0000766!3.49e-20!76;CL:0000860!5.21e-18!45;CL:0002009!7.27e-18!65;CL:0002194!7.99e-18!63;CL:0000576!7.99e-18!63;CL:0000040!7.99e-18!63;CL:0000559!7.99e-18!63;CL:0000557!3.66e-17!71;CL:0000048!3.99e-17!430;CL:0000723!1.74e-16!436;CL:0000839!3.04e-16!70;CL:0000034!4.06e-16!444;CL:0002371!2.90e-15!591;CL:0000738!6.67e-14!140;CL:0000763!1.06e-13!112;CL:0000049!1.06e-13!112;CL:0000144!1.62e-12!625;CL:0000134!1.50e-11!358;CL:0002320!1.91e-11!365;CL:0002087!7.76e-11!119;CL:0000988!3.71e-10!182;CL:0002031!3.89e-10!124;CL:0000037!7.17e-10!172;CL:0000566!7.17e-10!172;CL:0002032!8.38e-10!165;CL:0000837!8.38e-10!165;CL:0000219!1.30e-08!390;CL:0000003!2.78e-08!722;CL:0002139!3.57e-08!24;CL:0000115!9.64e-08!35;CL:0000222!4.57e-07!119;CL:0000548!6.51e-07!679;CL:0000004!6.51e-07!679;CL:0000255!6.51e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-22;33!CL:0002057;1.17e-22;33!CL:0000473;5.83e-20;39!CL:0000234;5.83e-20;39!CL:0000576;2.24e-15;48!CL:0000766;4.10e-12;69!CL:0002139;1.11e-07;24!CL:0000115;6.20e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.28e-29,48;CL:0000234,3.28e-29,48;CL:0000860,1.18e-27,42;CL:0002057,1.18e-27,42;CL:0000766,4.32e-25,72;CL:0002194,1.19e-23,59;CL:0000576,1.19e-23,59;CL:0000040,1.19e-23,59;CL:0000559,1.19e-23,59;CL:0002009,3.78e-23,61;CL:0000557,4.28e-21,67;CL:0000839,7.63e-21,66;CL:0000763,4.76e-18,108;CL:0000049,4.76e-18,108;CL:0000738,3.41e-16,136;CL:0000048,9.48e-14,427;CL:0000723,3.47e-13,433;CL:0002087,4.06e-13,115;CL:0000034,8.83e-13,441;CL:0000037,2.75e-12,168;CL:0002032,3.13e-12,161;CL:0000837,3.13e-12,161;CL:0000988,3.29e-12,177;CL:0002031,5.98e-12,120;CL:0000134,1.08e-09,354;CL:0002320,2.05e-09,361;CL:0000115,5.73e-09,36;CL:0002139,3.80e-08,24;CL:0000219,2.37e-07,386;CL:0002078,6.27e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;4.68e-20;42!CL:0000049;9.08e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.76e-19!216;UBERON:0002371!1.03e-15!80;UBERON:0002204!1.93e-14!167;UBERON:0001474!5.27e-14!86;UBERON:0002193!6.17e-14!112;UBERON:0004765!4.08e-13!101;UBERON:0001434!4.08e-13!101;UBERON:0002390!1.66e-12!102;UBERON:0003061!1.66e-12!102;UBERON:0002405!3.69e-11!115;UBERON:0002384!1.38e-10!375;UBERON:0000055!8.36e-10!69;UBERON:0001981!1.12e-08!60;UBERON:0007500!1.12e-08!60;UBERON:0004537!1.12e-08!60;UBERON:0006965!1.12e-08!60;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0004535!7.09e-08!110;UBERON:0001637!8.40e-08!42;UBERON:0003509!8.40e-08!42;UBERON:0004572!8.40e-08!42;UBERON:0001009!1.19e-07!113;UBERON:0004872!7.47e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.25e-20,203;UBERON:0002371,2.67e-18,76;UBERON:0002405,4.18e-18,93;UBERON:0001474,8.21e-17,82;UBERON:0002193,8.27e-17,108;UBERON:0002390,7.03e-15,98;UBERON:0003061,7.03e-15,98;UBERON:0001434,7.80e-15,100;UBERON:0004765,8.60e-15,90;UBERON:0002204,9.11e-14,167;UBERON:0000926,1.31e-13,315;UBERON:0004120,1.31e-13,315;UBERON:0006603,1.31e-13,315;UBERON:0002384,8.92e-09,371;UBERON:0000055,9.31e-09,68;UBERON:0007500,2.15e-07,59;UBERON:0001981,2.15e-07,59;UBERON:0004537,2.15e-07,59;UBERON:0006965,2.15e-07,59;UBERON:0001637,3.98e-07,42;UBERON:0003509,3.98e-07,42;UBERON:0004572,3.98e-07,42;UBERON:0002049,4.78e-07,78;UBERON:0007798,4.78e-07,78 | |||
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| ||
|short_description=p1@AY555145 | |||
}} | }} |
Latest revision as of 19:11, 18 September 2015
Short description: | p1@AY555145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AY555145_5end |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | -368bp_to_AY555145_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.25e-20 | 203 |
bone marrow | 2.67e-18 | 76 |
immune system | 4.18e-18 | 93 |
bone element | 8.21e-17 | 82 |
hemolymphoid system | 8.27e-17 | 108 |
hematopoietic system | 7.03e-15 | 98 |
blood island | 7.03e-15 | 98 |
skeletal system | 7.80e-15 | 100 |
skeletal element | 8.60e-15 | 90 |
musculoskeletal system | 9.11e-14 | 167 |
mesoderm | 1.31e-13 | 315 |
mesoderm-derived structure | 1.31e-13 | 315 |
presumptive mesoderm | 1.31e-13 | 315 |
connective tissue | 8.92e-09 | 371 |
vessel | 9.31e-09 | 68 |
epithelial tube open at both ends | 2.15e-07 | 59 |
blood vessel | 2.15e-07 | 59 |
blood vasculature | 2.15e-07 | 59 |
vascular cord | 2.15e-07 | 59 |
artery | 3.98e-07 | 42 |
arterial blood vessel | 3.98e-07 | 42 |
arterial system | 3.98e-07 | 42 |
vasculature | 4.78e-07 | 78 |
vascular system | 4.78e-07 | 78 |