FFCP PHASE1:Hg19::chr1:174843548..174843591,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:174843548..174843591,+
|short_description=p4@RABGAP1L
|description=CAGE_peak_4_at_RABGAP1L_5end
|association_with_transcript=-4bp_to_ENST00000478442,uc001g...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000478442,uc001gkf.2_5end | |||
|cluster_id=chr1:174843548..174843591,+ | |||
|description=CAGE_peak_4_at_RABGAP1L_5end | |||
|id=chr1:174843548..174843591,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.89e-37!140;CL:0002087!1.25e-34!119;CL:0002031!3.31e-30!124;CL:0002057!1.33e-27!42;CL:0000037!9.01e-25!172;CL:0000566!9.01e-25!172;CL:0000766!1.90e-24!76;CL:0000860!2.59e-24!45;CL:0002032!7.80e-23!165;CL:0000837!7.80e-23!165;CL:0002194!9.32e-23!63;CL:0000576!9.32e-23!63;CL:0000040!9.32e-23!63;CL:0000559!9.32e-23!63;CL:0000839!1.20e-21!70;CL:0000988!1.86e-21!182;CL:0002009!2.57e-21!65;CL:0000557!1.01e-19!71;CL:0000763!1.92e-12!112;CL:0000049!1.92e-12!112;CL:0000945!2.50e-11!24;CL:0000826!2.50e-11!24;CL:0000542!1.42e-10!53;CL:0000051!1.42e-10!53;CL:0000838!5.35e-10!52;CL:0002393!2.83e-08!9;CL:0002397!2.83e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-22;33!CL:0002057;1.02e-22;33!CL:0000576;6.74e-21;48!CL:0000473;1.04e-18;39!CL:0000234;1.04e-18;39!CL:0000766;1.03e-14;69!CL:0000945;2.41e-13;24!CL:0002087;3.36e-13;104!CL:0000738;1.19e-08;136!CL:0000236;3.55e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.63e-39,136;CL:0002087,5.88e-39,115;CL:0000860,4.49e-33,42;CL:0002057,4.49e-33,42;CL:0000473,1.54e-32,48;CL:0000234,1.54e-32,48;CL:0002031,9.59e-32,120;CL:0000766,2.19e-29,72;CL:0002194,1.28e-28,59;CL:0000576,1.28e-28,59;CL:0000040,1.28e-28,59;CL:0000559,1.28e-28,59;CL:0002009,5.06e-27,61;CL:0000037,1.56e-26,168;CL:0002032,1.16e-24,161;CL:0000837,1.16e-24,161;CL:0000839,1.71e-24,66;CL:0000557,7.85e-24,67;CL:0000988,1.99e-23,177;CL:0000763,1.30e-14,108;CL:0000049,1.30e-14,108;CL:0000945,1.57e-13,24;CL:0000826,1.57e-13,24;CL:0000542,7.14e-10,53;CL:0000051,7.14e-10,53;CL:0002393,1.11e-09,9;CL:0002397,1.11e-09,9;CL:0000838,3.04e-09,52;CL:0000236,7.36e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.80e-24!102;UBERON:0003061!9.80e-24!102;UBERON:0002193!1.57e-21!112;UBERON:0007023!3.55e-21!115;UBERON:0002371!9.59e-17!80;UBERON:0001474!5.69e-14!86;UBERON:0002405!1.29e-12!115;UBERON:0004765!3.00e-09!101;UBERON:0001434!3.00e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.40e-07;15!UBERON:0000179;7.40e-07;15!UBERON:0000463;7.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.81e-29,98;UBERON:0003061,3.81e-29,98;UBERON:0002193,6.71e-26,108;UBERON:0002371,7.60e-21,76;UBERON:0002405,3.41e-20,93;UBERON:0001474,6.82e-18,82;UBERON:0004765,1.21e-14,90;UBERON:0007023,3.89e-13,114;UBERON:0001434,1.99e-11,100;UBERON:0003081,3.37e-08,203;UBERON:0000178,6.71e-07,15;UBERON:0000179,6.71e-07,15;UBERON:0000463,6.71e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.527533956456907,0,0,2.6893005858071,0,0,0,0,0,0,0.572471974262113,0,0.125542639594803,1.98674854944673,1.55991119954897,1.10195093839151,15.7345710739562,5.75744097145819,7.27635779585557,0,0,0,10.3031376771801,5.82893853198428,2.64240395401362,13.8498852132969,5.61524452916397,5.859293509328,12.7631820316757,7.12566065241755,10.0454471377333,3.05336301437086,3.77875943688809,6.0646015296954,1.85943229524548,2.87817521615278,3.09706370895104,8.05538698502021,8.19714260893122,13.9524515634265,4.48169384957604,9.68227025375739,13.5426486594342,1.12945403725563,3.27487380069415,5.39336362668203,13.7737751566906,13.1580901101198,15.983428144976,8.90598510504134,11.369428484433,11.9342930149154,8.12585868160035,6.80862269629368,9.34233373493363,5.52747063564835,6.25779502104242,14.5516525952428,28.4537766237683,13.6262725315399,60.127853613768,59.7852460262795,52.5132620913658,58.7044207423452,30.4410590407002,30.6360861396673,41.4672013678467,82.6536956849621,63.2555033493107,89.322771190906,10.5597746676794,6.55366333514558,4.44754626931777,3.41384178053206,5.20514783146816,9.19603903927173,3.96626923670917,2.86216126360609,1.70763890732835,2.93618594685469,2.6759125968766,0,1.68152568894461,2.37045676297569,0.196709770113833,0.786021525498329,0.616804496998528,0.668745981562712,1.30368906653436,0.473447805734733,0,3.67654507721073,2.65145316727353,3.32300841875432,3.5204502289452,2.43373507478783,3.38154303655683,1.31550323682941,1.93445012450094,0.869409257205157,0.296573126324121,0.535081656179426,1.04535523804977,1.35971211237079,3.06576394881537,1.71813722741315,4.04831507231205,2.86708872891687,0.651083453856419,1.90090408889675,2.86092726247768,2.94369205655162,4.99722906209383,3.55165878066025,4.10563998460523,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0.324547393654683,0.522389211897802,1.06366368415092,1.43094374583205,3.43196946468077,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.7634281982481,60.4335743545973,35.4391525752031,15.6528193073209,42.8945446488568,95.9890454369433,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0.982827216677626,1.18157981336281,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,6.89407617044712,0.234004265139238,0.445893486866185,0,0,0,0,0,0,1.97065295158377,0.704387472105808,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,6.02708509718552,2.10833939483032,0,0,0,0.144781306667579,0,0,0,2.75843064282698,0.431255149719035,1.54011643535698,0,0,0,0.167516265334349,0,3.74503511973591,2.99161459204025,4.55857064779639,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,11.9925455151275,8.41285383192606,5.01619521676188,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.828728900423067,0,0,0,0.902399225814824,0.616122696835318,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0,1.78413391131527,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0,0,3.60643540767028,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,1.23213432070436,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,10.9671070334078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,3.48332062874083,0.86101074534246,0,0,0.918893600827838,10.6563997938756,12.9988325214204,3.98753031021914,4.76463550915578,6.17043409629291,11.0240462902762,9.18053443304795,1.58625035258854,0,0,26.7093835419325,32.3297524718751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0,0,0,0,0,0,0,0,0,0,1.30998378285754,1.75809815126273,0,0,0,12.4147132063599,10.0967991483097,7.98617825458003,0,1.82870241333667,0,0,0,1.59398390600856,5.52567831062295,11.840839149151,0,9.60061482596342,0,2.60618218327248,0,0.511572370226872,2.17015492401254,9.57932369387759,0,0.969332746095218,0.74214478529481,0,0,0,0,1.70690172428249,0.254253650292766,0,0,0,0,0,1.4471572635049,0,0.331737779793674,0.295547618953547,0.438770794307945,0,0,1.30815439456455,0,3.68902247020896,7.89867270805995,0.108647371922008,5.74202087517455,1.00757352742049,6.92945208824225,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,3.98104772431402,2.12298154808014,6.72133159426988,0.296521128680622,0,0,2.22423738836234,0,1.63985112007737,27.3682183823499,6.06560318689478,0,11.4429476826323,3.62972148145992,0,2.78020950365347,0.150323419414493,0,0,0,0,0,0.284609546029793,0,3.29763502836749,0.195984794828755,0,2.79562669187248,0,0,0,0,1.26085721434945,0,2.48578814858586,0,0,0.949661939338181,22.0973062490327,0,2.34798294213288,0,2.59362750877391,0,10.4672948695798,0,0,0,0,0.104602846312333,0,0,1.80126086612937,2.60120219894787,0,0,0,1.39641200636127,0.229160424011684,0.717873024576814,4.3929380109778,0,0.44634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| 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| ||
|short_description=p4@RABGAP1L | |||
}} | }} |
Latest revision as of 19:15, 18 September 2015
Short description: | p4@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000478442, uc001gkf.2_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.81e-29 | 98 |
blood island | 3.81e-29 | 98 |
hemolymphoid system | 6.71e-26 | 108 |
bone marrow | 7.60e-21 | 76 |
immune system | 3.41e-20 | 93 |
bone element | 6.82e-18 | 82 |
skeletal element | 1.21e-14 | 90 |
adult organism | 3.89e-13 | 114 |
skeletal system | 1.99e-11 | 100 |
lateral plate mesoderm | 3.37e-08 | 203 |
blood | 6.71e-07 | 15 |
haemolymphatic fluid | 6.71e-07 | 15 |
organism substance | 6.71e-07 | 15 |