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FFCP PHASE1:Hg19::chr2:86790580..86790591,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=100526767,51652
|EntrezGene=100526767,51652
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=29865,38847
|HGNC=29865,38847
|TSSclassifier=strong
|UniProt=Q9Y3E7
|UniProt=Q9Y3E7
|association_with_transcript=8bp_to_ENST00000263856,uc002srj.2,uc002srk.2,uc002srl.2_5end
|association_with_transcript=8bp_to_ENST00000263856,uc002srj.2,uc002srk.2,uc002srl.2_5end
|cluster_id=chr2:86790580..86790591,-
|coexpression_cluster_id=C3045
|coexpression_cluster_id=C3045
|description=CAGE_peak_4_at_CHMP3_5end,CAGE_peak_4_at_RNF103-CHMP3_5end
|description=CAGE_peak_4_at_CHMP3_5end,CAGE_peak_4_at_RNF103-CHMP3_5end
|id=chr2:86790580..86790591,-
|id=chr2:86790580..86790591,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.83e-24!57;UBERON:0005068!1.83e-24!57;UBERON:0006241!1.83e-24!57;UBERON:0007135!1.83e-24!57;UBERON:0007023!2.10e-23!115;UBERON:0001017!3.22e-20!82;UBERON:0002616!3.35e-20!59;UBERON:0003075!8.19e-19!86;UBERON:0007284!8.19e-19!86;UBERON:0005743!1.03e-18!86;UBERON:0002346!1.19e-18!90;UBERON:0000955!1.51e-18!69;UBERON:0006238!1.51e-18!69;UBERON:0002780!2.17e-18!41;UBERON:0001890!2.17e-18!41;UBERON:0006240!2.17e-18!41;UBERON:0003080!5.99e-18!42;UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0002020!8.49e-17!34;UBERON:0003528!8.49e-17!34;UBERON:0001869!5.73e-16!32;UBERON:0001893!6.49e-16!34;UBERON:0002791!2.10e-15!33;UBERON:0004111!2.61e-14!241;UBERON:0002619!3.21e-13!22;UBERON:0000025!4.49e-13!194;UBERON:0000119!5.39e-13!312;UBERON:0000483!6.34e-13!309;UBERON:0000033!7.42e-13!123;UBERON:0000924!7.98e-13!173;UBERON:0006601!7.98e-13!173;UBERON:0000153!1.01e-12!129;UBERON:0007811!1.01e-12!129;UBERON:0004121!1.06e-12!169;UBERON:0003056!2.08e-12!61;UBERON:0000477!2.48e-12!286;UBERON:0000475!5.86e-12!365;UBERON:0000956!6.04e-12!25;UBERON:0000203!6.04e-12!25;UBERON:0001950!6.16e-12!20;UBERON:0000481!1.04e-08!347;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15
|ontology_enrichment_uberon=UBERON:0001049!1.83e-24!57;UBERON:0005068!1.83e-24!57;UBERON:0006241!1.83e-24!57;UBERON:0007135!1.83e-24!57;UBERON:0007023!2.10e-23!115;UBERON:0001017!3.22e-20!82;UBERON:0002616!3.35e-20!59;UBERON:0003075!8.19e-19!86;UBERON:0007284!8.19e-19!86;UBERON:0005743!1.03e-18!86;UBERON:0002346!1.19e-18!90;UBERON:0000955!1.51e-18!69;UBERON:0006238!1.51e-18!69;UBERON:0002780!2.17e-18!41;UBERON:0001890!2.17e-18!41;UBERON:0006240!2.17e-18!41;UBERON:0003080!5.99e-18!42;UBERON:0000073!5.19e-17!94;UBERON:0001016!5.19e-17!94;UBERON:0002020!8.49e-17!34;UBERON:0003528!8.49e-17!34;UBERON:0001869!5.73e-16!32;UBERON:0001893!6.49e-16!34;UBERON:0002791!2.10e-15!33;UBERON:0004111!2.61e-14!241;UBERON:0002619!3.21e-13!22;UBERON:0000025!4.49e-13!194;UBERON:0000119!5.39e-13!312;UBERON:0000483!6.34e-13!309;UBERON:0000033!7.42e-13!123;UBERON:0000924!7.98e-13!173;UBERON:0006601!7.98e-13!173;UBERON:0000153!1.01e-12!129;UBERON:0007811!1.01e-12!129;UBERON:0004121!1.06e-12!169;UBERON:0003056!2.08e-12!61;UBERON:0000477!2.48e-12!286;UBERON:0000475!5.86e-12!365;UBERON:0000956!6.04e-12!25;UBERON:0000203!6.04e-12!25;UBERON:0001950!6.16e-12!20;UBERON:0000481!1.04e-08!347;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15
|ontology_enrichment_uberon_v019=UBERON:0003528;3.01e-18;34!UBERON:0002020;3.01e-18;34!UBERON:0001869;4.01e-18;32!UBERON:0002791;8.96e-18;32!UBERON:0002619;2.67e-17;22!UBERON:0001893;1.25e-16;34!UBERON:0002780;8.92e-16;41!UBERON:0001890;8.92e-16;41!UBERON:0001950;1.33e-15;20!UBERON:0000956;3.74e-15;25!UBERON:0000203;3.74e-15;25!UBERON:0000073;9.56e-15;53!UBERON:0002616;9.56e-15;53!UBERON:0001017;1.70e-11;75!UBERON:0000955;2.72e-11;68!UBERON:0001016;7.75e-09;83!UBERON:0002420;6.59e-08;9!UBERON:0007245;6.59e-08;9!UBERON:0010009;6.59e-08;9!UBERON:0010011;6.59e-08;9!UBERON:0000454;6.59e-08;9!UBERON:0000125;1.09e-07;9!UBERON:0002308;1.09e-07;9
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|short_description=p4@CHMP3,p4@RNF103-CHMP3
|short_description=p4@CHMP3,p4@RNF103-CHMP3
}}
}}

Latest revision as of 19:15, 18 September 2015

Short description:p4@CHMP3, p4@RNF103-CHMP3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_CHMP3_5end, CAGE_peak_4_at_RNF103-CHMP3_5end
Coexpression cluster:C3045_occipital_brain_hippocampus_medial_cerebellum_temporal_amygdala
Association with transcript: 8bp_to_ENST00000263856, uc002srj.2, uc002srk.2, uc002srl.2_5end
EntrezGene:100526767,51652
HGNC: 38847&submit=Submit 29865, 38847
UniProt: Q9Y3E7
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data