FFCP PHASE1:Hg19::chr2:86790580..86790591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=100526767,51652 | |EntrezGene=100526767,51652 | ||
Line 8: | Line 8: | ||
|UniProt=Q9Y3E7 | |UniProt=Q9Y3E7 | ||
|association_with_transcript=8bp_to_ENST00000263856,uc002srj.2,uc002srk.2,uc002srl.2_5end | |association_with_transcript=8bp_to_ENST00000263856,uc002srj.2,uc002srk.2,uc002srl.2_5end | ||
|cluster_id=chr2:86790580..86790591,- | |||
|coexpression_cluster_id=C3045 | |coexpression_cluster_id=C3045 | ||
|description=CAGE_peak_4_at_CHMP3_5end,CAGE_peak_4_at_RNF103-CHMP3_5end | |description=CAGE_peak_4_at_CHMP3_5end,CAGE_peak_4_at_RNF103-CHMP3_5end |
Latest revision as of 19:15, 18 September 2015
Short description: | p4@CHMP3, p4@RNF103-CHMP3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHMP3_5end, CAGE_peak_4_at_RNF103-CHMP3_5end |
Coexpression cluster: | C3045_occipital_brain_hippocampus_medial_cerebellum_temporal_amygdala |
Association with transcript: | 8bp_to_ENST00000263856, uc002srj.2, uc002srk.2, uc002srl.2_5end |
EntrezGene: | 100526767,51652 |
HGNC: | 38847&submit=Submit 29865, 38847 |
UniProt: | Q9Y3E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CHMP3p4@RNF103-CHMP3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 2.13e-29 | 56 |
neural rod | 2.13e-29 | 56 |
future spinal cord | 2.13e-29 | 56 |
neural keel | 2.13e-29 | 56 |
regional part of nervous system | 3.19e-27 | 53 |
regional part of brain | 3.19e-27 | 53 |
central nervous system | 5.22e-25 | 81 |
adult organism | 1.80e-23 | 114 |
brain | 3.49e-23 | 68 |
future brain | 3.49e-23 | 68 |
Showing 1 to 10 of 47 entries