FFCP PHASE1:Hg19::chr7:45952555..45952566,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:45952555..45952566,- to FFCP PHASE1:Hg19::chr7:45952555..45952566,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=60bp_to_AF370418_5end | |||
|cluster_id=chr7:45952555..45952566,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_18_at_IGFBP3_5end | |||
|id=chr7:45952555..45952566,- | |||
|ontology_enrichment_celltype=CL:0000057!8.22e-11!75;CL:0002620!1.80e-10!23;CL:0000055!2.54e-09!180;CL:0000153!1.38e-07!9;CL:0000447!1.38e-07!9;CL:0000499!1.96e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.67e-20;23!CL:0000153;7.77e-15;9!CL:0000447;7.77e-15;9!CL:0000135;1.32e-11;3!CL:0000388;1.32e-11;3!CL:0000327;1.68e-11;15!CL:0000499;2.04e-11;28!CL:0000138;6.50e-11;6!CL:0002617;5.53e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.53e-20,23;CL:0000153,7.09e-15,9;CL:0000447,7.09e-15,9;CL:0000057,2.42e-12,76;CL:0000135,1.47e-11,3;CL:0000388,1.47e-11,3;CL:0000327,1.69e-11,15;CL:0000499,2.12e-11,28;CL:0000058,6.52e-11,6;CL:0000138,6.52e-11,6;CL:0002617,5.35e-08,2;CL:0000048,1.92e-07,427;CL:0000723,3.36e-07,433;CL:0000034,6.91e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.18e-07!5;DOID:450!1.18e-07!5;DOID:66!1.18e-07!5;DOID:423!1.18e-07!5;DOID:0080000!1.18e-07!5;DOID:11722!1.18e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.92e-18;5!DOID:450;3.92e-18;5!DOID:66;3.92e-18;5!DOID:423;3.92e-18;5!DOID:0080000;3.92e-18;5!DOID:11722;3.92e-18;5!DOID:3350;5.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.01e-18,5;DOID:450,4.01e-18,5;DOID:66,4.01e-18,5;DOID:423,4.01e-18,5;DOID:0080000,4.01e-18,5;DOID:11722,4.01e-18,5;DOID:3350,7.62e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.61e-09!14;UBERON:0000158!7.61e-09!14;UBERON:0003124!2.94e-08!7;UBERON:0003688!9.77e-08!6;UBERON:0002358!9.77e-08!6;UBERON:0003684!9.77e-08!6;UBERON:0001178!9.77e-08!6;UBERON:0002199!1.29e-07!45;UBERON:0002416!1.29e-07!45;UBERON:0002097!1.53e-07!40;UBERON:0004923!1.98e-07!57;UBERON:0000478!8.47e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.32e-11;3!UBERON:0000043;1.32e-11;3!UBERON:0007845;1.32e-11;3!UBERON:0002097;3.13e-11;41!UBERON:0004457;1.45e-09;9!UBERON:0000042;1.45e-09;9!UBERON:0002199;1.07e-08;46!UBERON:0002416;1.07e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.06e-14,41;UBERON:0002199,3.13e-12,46;UBERON:0002416,3.13e-12,46;UBERON:0007846,1.47e-11,3;UBERON:0000043,1.47e-11,3;UBERON:0007845,1.47e-11,3;UBERON:0004457,3.97e-07,12;UBERON:0000042,3.97e-07,12 | |||
|phase1_expression=2.18014055124668,1.49870366723688,1.26858963686374,3.00219895059391,0.893922188854576,3.48935409640147,0,0,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,22.4092274478431,16.5441510509844,17.0918892373772,0.795285947051099,11.1926020169606,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,0.286836620748814,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.150238058906597,0,3.94657198515496,1.49490172172997,3.60284231971255,4.50136644126603,1.03052529238439,1.8034837803194,2.97786970130544,1.0126579934476,0.68205903612839,3.28163906517349,3.03764665519588,0,5.68015348026583,2.61955455391865,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0,0,0,0,0,1.14861935834114,0,1.30303176000821,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.630809660135739,0.585707074963566,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0.744323423456331,0.920771839728375,1.12264037773229,0.512556597022804,0.511707249066704,1.76939313257968,0,0,0.177561725313127,0,0,0.348631135379878,0,0.200506470303285,0,0.34444334449382,0,0.262248829918848,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,2.20368642781448,0,0,0,0,0.37064843820784,2.28999818787186,0,0,0.190630193923825,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.731140468893853,0,0,0,2.26016233240486,0.551365343546124,1.99031692572366,3.5076070820301,0,0,0,0,0.281695602532241,0,0,1.07001315444375,0,2.74439925886963,1.31717957183961,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.593929361665277,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,12.7526230941341,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.55200927785536,0.183195186803725,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,0,0,2.19790570540343,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.717149357331379,0.191915197319445,0,0,0,1.62899880526114,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.50313580350515,5.33886732957922,0.228840068396924,1.51230923763239,0.777186002913902,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,1.14241563650639,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0.673498977531838,1.26184898228651,0,0,0,0.226705925512272,0,0,0.895444205407437,0.617602894321944,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0.227662191351298,0.354809480650555,0,0,0,0,0,0,0,0,0,0,4.53447941559105,14.3325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,1.48798007266701,3.23522940041993,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0.359300808426348,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=2.18014055124668,1.49870366723688,1.26858963686374,3.00219895059391,0.893922188854576,3.48935409640147,0,0,0.522371256399677,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,22.4092274478431,16.5441510509844,17.0918892373772,0.795285947051099,11.1926020169606,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0,0.286836620748814,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919463387397059,0.150238058906597,0,3.94657198515496,1.49490172172997,3.60284231971255,4.50136644126603,1.03052529238439,1.8034837803194,2.97786970130544,1.0126579934476,0.68205903612839,3.28163906517349,3.03764665519588,0,5.68015348026583,2.61955455391865,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0,0,0,0,0,1.14861935834114,0,1.30303176000821,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.630809660135739,0.585707074963566,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.604780586659361,0.744323423456331,0.920771839728375,1.12264037773229,0.512556597022804,0.511707249066704,1.76939313257968,0,0,0.177561725313127,0,0,0.348631135379878,0,0.200506470303285,0,0.34444334449382,0,0.262248829918848,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,2.20368642781448,0,0,0,0,0.37064843820784,2.28999818787186,0,0,0.190630193923825,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.731140468893853,0,0,0,2.26016233240486,0.551365343546124,1.99031692572366,3.5076070820301,0,0,0,0,0.281695602532241,0,0,1.07001315444375,0,2.74439925886963,1.31717957183961,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.593929361665277,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,12.7526230941341,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.55200927785536,0.183195186803725,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0,1.20390222730132,0,0,0,0,0,0,0,0,0,0,0,0,2.19790570540343,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.717149357331379,0.191915197319445,0,0,0,1.62899880526114,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0.378806010550178,0.50313580350515,5.33886732957922,0.228840068396924,1.51230923763239,0.777186002913902,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,1.14241563650639,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0,0.673498977531838,1.26184898228651,0,0,0,0.226705925512272,0,0,0.895444205407437,0.617602894321944,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.127762427639595,0,0,0,0.227662191351298,0.354809480650555,0,0,0,0,0,0,0,0,0,0,4.53447941559105,14.3325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,1.48798007266701,3.23522940041993,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0.359300808426348,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p18@IGFBP3 | |||
}} | }} |
Latest revision as of 19:22, 18 September 2015
Short description: | p18@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 60bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.53e-20 | 23 |
GAG secreting cell | 7.09e-15 | 9 |
carbohydrate secreting cell | 7.09e-15 | 9 |
fibroblast | 2.42e-12 | 76 |
fibrocyte | 1.47e-11 | 3 |
tendon cell | 1.47e-11 | 3 |
extracellular matrix secreting cell | 1.69e-11 | 15 |
stromal cell | 2.12e-11 | 28 |
chondroblast | 6.52e-11 | 6 |
chondrocyte | 6.52e-11 | 6 |
adipocyte of breast | 5.35e-08 | 2 |
multi fate stem cell | 1.92e-07 | 427 |
somatic stem cell | 3.36e-07 | 433 |
stem cell | 6.91e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.06e-14 | 41 |
integument | 3.13e-12 | 46 |
integumental system | 3.13e-12 | 46 |
dense regular connective tissue | 1.47e-11 | 3 |
tendon | 1.47e-11 | 3 |
regular connective tissue | 1.47e-11 | 3 |
cavity lining | 3.97e-07 | 12 |
serous membrane | 3.97e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.01e-18 | 5 |
myotonic disease | 4.01e-18 | 5 |
muscle tissue disease | 4.01e-18 | 5 |
myopathy | 4.01e-18 | 5 |
muscular disease | 4.01e-18 | 5 |
myotonic dystrophy | 4.01e-18 | 5 |
mesenchymal cell neoplasm | 7.62e-08 | 2 |