FFCP PHASE1:Hg19::chr1:62784864..62784917,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:62784864..62784917,- to FFCP PHASE1:Hg19::chr1:62784864..62784917,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163782 | |EntrezGene=163782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27263 | |HGNC=27263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000354381_5end | |||
|cluster_id=chr1:62784864..62784917,- | |||
|coexpression_cluster_id=C3990 | |||
|description=CAGE_peak_2_at_KANK4_5end | |||
|id=chr1:62784864..62784917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.95e-11;19!CL:0002541;6.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.06e-11,19;CL:0002541,5.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.94e-07;3!UBERON:0003057;3.94e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-31!115;UBERON:0001049!1.97e-19!57;UBERON:0005068!1.97e-19!57;UBERON:0006241!1.97e-19!57;UBERON:0007135!1.97e-19!57;UBERON:0002616!1.99e-14!59;UBERON:0003080!1.04e-13!42;UBERON:0003075!1.68e-13!86;UBERON:0007284!1.68e-13!86;UBERON:0002780!4.21e-13!41;UBERON:0001890!4.21e-13!41;UBERON:0006240!4.21e-13!41;UBERON:0001017!6.81e-13!82;UBERON:0000955!1.98e-12!69;UBERON:0006238!1.98e-12!69;UBERON:0005743!2.16e-12!86;UBERON:0002346!3.47e-12!90;UBERON:0000073!6.66e-12!94;UBERON:0001016!6.66e-12!94;UBERON:0004121!6.67e-12!169;UBERON:0000924!4.13e-11!173;UBERON:0006601!4.13e-11!173;UBERON:0000064!5.92e-11!219;UBERON:0002020!7.60e-11!34;UBERON:0003528!7.60e-11!34;UBERON:0001893!1.13e-10!34;UBERON:0002791!4.31e-10!33;UBERON:0005631!6.81e-10!14;UBERON:0000158!6.81e-10!14;UBERON:0000153!9.11e-10!129;UBERON:0007811!9.11e-10!129;UBERON:0004119!1.06e-09!169;UBERON:0000925!1.06e-09!169;UBERON:0006595!1.06e-09!169;UBERON:0000062!1.87e-09!511;UBERON:0000033!2.53e-09!123;UBERON:0002298!3.12e-09!8;UBERON:0001869!3.70e-09!32;UBERON:0000475!8.30e-09!365;UBERON:0003056!3.24e-08!61;UBERON:0002308!5.68e-08!9;UBERON:0000125!5.68e-08!9;UBERON:0003124!1.76e-07!7;UBERON:0003076!4.64e-07!15;UBERON:0003057!4.64e-07!15;UBERON:0000077!6.24e-07!130;UBERON:0000468!6.94e-07!659;UBERON:0004921!7.60e-07!129;UBERON:0004185!7.60e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.67e-13;6!UBERON:0005631;1.16e-12;10!UBERON:0000158;1.16e-12;10!UBERON:0000478;1.49e-09;24!UBERON:0002784;3.33e-08;4!UBERON:0000305;1.03e-07;7!UBERON:0001987;1.05e-07;4!UBERON:0004732;1.63e-07;13!UBERON:0000988;1.99e-07;3!UBERON:0001896;2.16e-07;3!UBERON:0005290;2.16e-07;3!UBERON:0002240;3.94e-07;3!UBERON:0005174;3.94e-07;3!UBERON:0001137;3.94e-07;3!UBERON:0001894;5.78e-07;7!UBERON:0003124;6.56e-07;3!UBERON:0000920;6.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.07e-18,14;UBERON:0000158,1.07e-18,14;UBERON:0001049,1.23e-13,56;UBERON:0005068,1.23e-13,56;UBERON:0006241,1.23e-13,56;UBERON:0007135,1.23e-13,56;UBERON:0002298,3.34e-13,6;UBERON:0003124,5.13e-13,7;UBERON:0007023,9.21e-13,114;UBERON:0000073,1.45e-10,53;UBERON:0002616,1.45e-10,53;UBERON:0003076,2.53e-10,15;UBERON:0003057,2.53e-10,15;UBERON:0010371,2.98e-10,104;UBERON:0003075,5.34e-10,82;UBERON:0007284,5.34e-10,82;UBERON:0004121,9.37e-10,171;UBERON:0000924,9.37e-10,171;UBERON:0006601,9.37e-10,171;UBERON:0000478,1.37e-09,24;UBERON:0002346,3.26e-09,86;UBERON:0001016,4.65e-09,89;UBERON:0001017,6.32e-09,81;UBERON:0011216,1.26e-08,223;UBERON:0002784,3.16e-08,4;UBERON:0000955,9.72e-08,68;UBERON:0006238,9.72e-08,68;UBERON:0000305,1.01e-07,7;UBERON:0001987,1.06e-07,4;UBERON:0004340,1.06e-07,4;UBERON:0004732,1.56e-07,13;UBERON:0000988,1.87e-07,3;UBERON:0001896,2.08e-07,3;UBERON:0005290,2.08e-07,3;UBERON:0010096,2.08e-07,3;UBERON:0002240,3.54e-07,3;UBERON:0005174,3.54e-07,3;UBERON:0001137,3.54e-07,3;UBERON:0001894,5.26e-07,7;UBERON:0006222,5.26e-07,7;UBERON:0000920,5.50e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.704772020479856,0,1.34088328328186,0,2.53299878168311,0,0,0,0,8.30077214094655,8.96807725976742,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7717156823066,0.486634870302636,0,0,0.175669571386252,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,2.89891279744945,1.63647672354501,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.98775256867763,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,3.02367830757947,0.283550194484773,0.806026704325635,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.35142424497814,0,2.27407504055985,0,0,0.184369168541703,0,0,0.686286847621712,0,0,0,1.5156378572313,4.99306318531491,2.11673205330776,1.73675465473144,3.6830873589135,2.80660094433074,1.02511319404561,1.02341449813341,1.28683136914886,0,0,0,0,0,0,0.483437798366489,4.61164881697555,0.920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,2.29706215198469,2.60024098414608,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,4.62797763010739,1.92190067365106,0.893288987462089,0.6069466851333,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,2.17781969722645,0.376575203107117,0.86101074534246,0,3.10401107475673,0.689170200620878,0,0,0,0,0,0,0,0,0,29.8368755131641,1.71528151186722,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,6.68484557265532,6.23625829748541,4.91457123358771,0,0,0,0,0.211125408127993,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.834912883456661,0,0,0,1.44999915086959,0,0,4.25497827182285,0,0.291604613383254,3.12524990879926,0.885741385813839,0.241192877250816,0,0.331737779793674,0.591095237907095,1.31631238292384,0.435753854075961,0.139423744278603,0.153900517007594,0,5.30296980092538,1.88491053260521,9.77826347298073,6.69902435437031,2.83952539545773,6.39641731222362,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0.707660516026713,0,0,0,0,6.94231669700974,5.61804353109152,4.91955336023212,0,0,0.485560759068186,0.789168805698781,4.83962864194656,0.30607276163049,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,0.193978032976839,1.235585773681,2.25980740780532,0,0,0.443175571691151,1.56441106187842,0,0.426905989478705,1.39866726707491,3.02589876023623,0,0,0,0,0.471388069233591,0,0,0,2.02265412931063,3.00210144354895,3.28572909340783,0,0,0,0.558564802544508,2.52076466412852,0,0.399358000997982,0,0,0.470284307407084,0,1.16495949527454,1.6544468284517,2.06039645952916,1.61768505250044,0.393709926058995,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,0.728994679896296,0.335434687599266,0.0788057072991982,0.629455057619977,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,1.32506888912221,10.8597683343702,4.89260626447953,0,2.81926008926669,0.320362237703084,1.10043013569766,1.65695622138878,0,0,0,0,10.33633826402,18.0496723696344,14.0918965311192,9.83617892129413,0,0,0.366078794705889,0.625954653532499,8.60113793535107,5.99016878299002,9.50074965003167,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901545653983311,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0.226705925512272,0.231522474323834,0,0,0.617602894321944,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,1.40683808434017,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.957803154342908,1.8460472781668,0.252071696221718,1.24483054435592,0.161475645631851,24.2708014440562,0,0,0,0,0,0,2.58591088751157,0.0752103283492573,0,5.47059807863165,5.76194727859129,0,0,1.35075169236789,0,1.2401207790071,2.09272173639893,0,4.38606213485746,0.496211178389294,0,2.17196126987312,1.60710550763486,3.02655349996942,0,0,2.21755925406597,0,0,16.1088267155091,0.855046056317038,0,0,0.78493092850514,0.785577949580009,0.280272163313789,0.913158720509496,0,0,1.57248397188644,0,0,0,0,0,0,0,7.31386509994472,0,0,1.2701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| ||
|short_description=p2@KANK4 | |||
}} | }} |
Latest revision as of 19:50, 18 September 2015
Short description: | p2@KANK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KANK4_5end |
Coexpression cluster: | C3990_Wilms_choriocarcinoma_chorionic_mature_Amniotic_amniotic_optic |
Association with transcript: | 54bp_to_ENST00000354381_5end |
EntrezGene: | KANK4 |
HGNC: | 27263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.06e-11 | 19 |
chorionic membrane mesenchymal stem cell | 5.50e-07 | 3 |