FFCP PHASE1:Hg19::chr11:62369383..62369399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9219 | |EntrezGene=9219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7411 | |HGNC=7411 | ||
|TSSclassifier=strong | |||
|UniProt=O94776 | |UniProt=O94776 | ||
|association_with_transcript=-71bp_to_ENST00000278823,NM_004739_5end | |association_with_transcript=-71bp_to_ENST00000278823,NM_004739_5end | ||
|cluster_id=chr11:62369383..62369399,- | |||
|description=CAGE_peak_6_at_MTA2_5end | |description=CAGE_peak_6_at_MTA2_5end | ||
|id=chr11:62369383..62369399,- | |id=chr11:62369383..62369399,- | ||
|ontology_enrichment_celltype=CL:0000057!1.25e-07!75;CL:0000055!6.68e-07!180 | |ontology_enrichment_celltype=CL:0000057!1.25e-07!75;CL:0000055!6.68e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.07e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.30e-20!625;UBERON:0000468!1.60e-20!659;UBERON:0000480!1.70e-20!626;UBERON:0000923!3.59e-14!604;UBERON:0005291!3.59e-14!604;UBERON:0006598!3.59e-14!604;UBERON:0002532!3.59e-14!604;UBERON:0002050!6.16e-14!605;UBERON:0005423!6.16e-14!605;UBERON:0000922!8.27e-13!612;UBERON:0000475!1.19e-11!365;UBERON:0004111!2.84e-11!241;UBERON:0000477!3.38e-10!286;UBERON:0000119!3.84e-10!312;UBERON:0000483!6.14e-10!309;UBERON:0000062!7.77e-10!511;UBERON:0000479!5.97e-09!787;UBERON:0000025!2.43e-08!194;UBERON:0000926!3.42e-08!448;UBERON:0004120!3.42e-08!448;UBERON:0006603!3.42e-08!448;UBERON:0000055!3.63e-08!69;UBERON:0002100!7.85e-08!216;UBERON:0004872!1.15e-07!84;UBERON:0001981!2.07e-07!60;UBERON:0007500!2.07e-07!60;UBERON:0004537!2.07e-07!60;UBERON:0006965!2.07e-07!60;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79 | |ontology_enrichment_uberon=UBERON:0000467!1.30e-20!625;UBERON:0000468!1.60e-20!659;UBERON:0000480!1.70e-20!626;UBERON:0000923!3.59e-14!604;UBERON:0005291!3.59e-14!604;UBERON:0006598!3.59e-14!604;UBERON:0002532!3.59e-14!604;UBERON:0002050!6.16e-14!605;UBERON:0005423!6.16e-14!605;UBERON:0000922!8.27e-13!612;UBERON:0000475!1.19e-11!365;UBERON:0004111!2.84e-11!241;UBERON:0000477!3.38e-10!286;UBERON:0000119!3.84e-10!312;UBERON:0000483!6.14e-10!309;UBERON:0000062!7.77e-10!511;UBERON:0000479!5.97e-09!787;UBERON:0000025!2.43e-08!194;UBERON:0000926!3.42e-08!448;UBERON:0004120!3.42e-08!448;UBERON:0006603!3.42e-08!448;UBERON:0000055!3.63e-08!69;UBERON:0002100!7.85e-08!216;UBERON:0004872!1.15e-07!84;UBERON:0001981!2.07e-07!60;UBERON:0007500!2.07e-07!60;UBERON:0004537!2.07e-07!60;UBERON:0006965!2.07e-07!60;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,3.98e-11,581;UBERON:0002050,1.15e-10,564;UBERON:0000923,4.84e-10,560;UBERON:0010316,4.84e-10,560;UBERON:0005291,4.84e-10,560;UBERON:0006598,4.84e-10,560;UBERON:0010317,4.84e-10,560;UBERON:0002532,4.84e-10,560;UBERON:0004111,2.33e-09,240;UBERON:0000922,3.01e-09,592;UBERON:0000119,5.99e-09,309;UBERON:0000483,9.51e-09,306;UBERON:0000055,4.03e-08,68;UBERON:0004872,6.02e-08,83;UBERON:0007500,1.44e-07,59;UBERON:0001981,1.44e-07,59;UBERON:0004537,1.44e-07,59;UBERON:0006965,1.44e-07,59;UBERON:0003102,1.67e-07,99;UBERON:0002049,1.76e-07,78;UBERON:0007798,1.76e-07,78;UBERON:0000479,2.07e-07,773;UBERON:0000025,3.41e-07,192 | |||
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| ||
|short_description=p6@MTA2 | |short_description=p6@MTA2 | ||
}} | }} |
Latest revision as of 20:03, 18 September 2015
Short description: | p6@MTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -71bp_to_ENST00000278823, NM_004739_5end |
EntrezGene: | MTA2 |
HGNC: | 7411 |
UniProt: | O94776 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.07e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 3.98e-11 | 581 |
embryonic structure | 1.15e-10 | 564 |
germ layer | 4.84e-10 | 560 |
germ layer / neural crest | 4.84e-10 | 560 |
embryonic tissue | 4.84e-10 | 560 |
presumptive structure | 4.84e-10 | 560 |
germ layer / neural crest derived structure | 4.84e-10 | 560 |
epiblast (generic) | 4.84e-10 | 560 |
anatomical conduit | 2.33e-09 | 240 |
embryo | 3.01e-09 | 592 |
cell layer | 5.99e-09 | 309 |
epithelium | 9.51e-09 | 306 |
vessel | 4.03e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 6.02e-08 | 83 |
epithelial tube open at both ends | 1.44e-07 | 59 |
blood vessel | 1.44e-07 | 59 |
blood vasculature | 1.44e-07 | 59 |
vascular cord | 1.44e-07 | 59 |
surface structure | 1.67e-07 | 99 |
vasculature | 1.76e-07 | 78 |
vascular system | 1.76e-07 | 78 |
tissue | 2.07e-07 | 773 |
tube | 3.41e-07 | 192 |