FFCP PHASE1:Hg19::chr12:51718436..51718458,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:51718436..51718458,-
|short_description=p6@BIN2
|description=CAGE_peak_6_at_BIN2_5end
|association_with_transcript=0bp_to_ENST00000544402,uc010sng.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51411 | |EntrezGene=51411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1053 | |HGNC=1053 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0W4 | |UniProt=F5H0W4 | ||
|association_with_transcript=0bp_to_ENST00000544402,uc010sng.1_5end | |||
|cluster_id=chr12:51718436..51718458,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_6_at_BIN2_5end | |||
|id=chr12:51718436..51718458,- | |||
|ontology_enrichment_celltype=CL:0000039!5.42e-31!7;CL:0000586!5.42e-31!7;CL:0002541!1.22e-19!3;CL:0002057!1.22e-09!42;CL:0000860!6.67e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.89e-54;7!CL:0000586;3.89e-54;7!CL:0002541;4.05e-47;3!CL:0000349;2.37e-13;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.85e-54,7;CL:0000586,4.85e-54,7;CL:0002541,4.05e-47,3;CL:0000349,2.37e-13,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.21e-16;1!UBERON:0000358;2.25e-16;1!UBERON:0009117;5.26e-07;10!UBERON:0005564;5.26e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!1.74e-09!22;DOID:2994!1.74e-09!22;DOID:1799!1.36e-07!1;DOID:10165!1.36e-07!1;DOID:1798!1.36e-07!1;DOID:178!1.74e-07!1;DOID:326!1.74e-07!1;DOID:3978!1.74e-07!1;DOID:3394!1.74e-07!1;DOID:5844!1.74e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.34e-17;22!DOID:2994;2.34e-17;22!DOID:1799;1.21e-16;1!DOID:10165;1.21e-16;1!DOID:1798;1.21e-16;1!DOID:178;2.25e-16;1!DOID:326;2.25e-16;1!DOID:3978;2.25e-16;1!DOID:3394;2.25e-16;1!DOID:5844;2.25e-16;1!DOID:114;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.50e-17,22;DOID:2994,2.50e-17,22;DOID:1799,1.04e-16,1;DOID:10165,1.04e-16,1;DOID:1798,1.04e-16,1;DOID:178,1.93e-16,1;DOID:326,1.93e-16,1;DOID:3978,1.93e-16,1;DOID:3394,1.93e-16,1;DOID:5844,1.93e-16,1;DOID:114,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.22e-19!3;UBERON:0000920!1.22e-19!3;UBERON:0000473!2.93e-18!8;UBERON:0003124!1.26e-14!7;UBERON:0003135!3.11e-13!11;UBERON:0005631!5.07e-11!14;UBERON:0000158!5.07e-11!14;UBERON:0000478!8.13e-09!24;UBERON:0007029!2.67e-07!1;UBERON:0002146!4.34e-07!1;UBERON:0005623!4.34e-07!1;UBERON:0000991!8.03e-07!21;UBERON:0009196!8.03e-07!21;UBERON:0009117!8.03e-07!21;UBERON:0005564!8.03e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.05e-47;3!UBERON:0000920;4.05e-47;3!UBERON:0005631;5.00e-25;10!UBERON:0000158;5.00e-25;10!UBERON:0000478;8.54e-23;24!UBERON:0000473;1.53e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.05e-47,3;UBERON:0003124,1.27e-35,7;UBERON:0005631,1.58e-27,14;UBERON:0000158,1.58e-27,14;UBERON:0000478,8.54e-23,24;UBERON:0000473,1.65e-08,8 | |||
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|short_description=p6@BIN2 | |||
}} | }} |
Latest revision as of 20:11, 18 September 2015
Short description: | p6@BIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BIN2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000544402, uc010sng.1_5end |
EntrezGene: | BIN2 |
HGNC: | 1053 |
UniProt: | F5H0W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.85e-54 | 7 |
germ cell | 4.85e-54 | 7 |
chorionic membrane mesenchymal stem cell | 4.05e-47 | 3 |
extraembryonic cell | 2.37e-13 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.05e-47 | 3 |
chorion | 1.27e-35 | 7 |
extraembryonic membrane | 1.58e-27 | 14 |
membranous layer | 1.58e-27 | 14 |
extraembryonic structure | 8.54e-23 | 24 |
testis | 1.65e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.50e-17 | 22 |
germ cell cancer | 2.50e-17 | 22 |
islet cell tumor | 1.04e-16 | 1 |
endocrine pancreas cancer | 1.04e-16 | 1 |
pancreatic endocrine carcinoma | 1.04e-16 | 1 |
vascular disease | 1.93e-16 | 1 |
ischemia | 1.93e-16 | 1 |
extrinsic cardiomyopathy | 1.93e-16 | 1 |
myocardial ischemia | 1.93e-16 | 1 |
myocardial infarction | 1.93e-16 | 1 |
heart disease | 6.94e-09 | 2 |