FFCP PHASE2:Hg19::chr11:62380680..62380705,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6094 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10254 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6094 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10254 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PMR7 | ||
|association_with_transcript=-295bp_to_ENST00000525947_5end | |association_with_transcript=-295bp_to_ENST00000525947_5end | ||
|cluster_id=chr11:62380680..62380705,+ | |cluster_id=chr11:62380680..62380705,+ | ||
Latest revision as of 20:15, 18 September 2015
| Short description: | p4@ROM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_ROM1_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | -295bp_to_ENST00000525947_5end |
| EntrezGene: | ROM1 |
| HGNC: | 10254 |
| UniProt: | E9PMR7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@ROM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| subcutaneous fat cell | 5.74e-10 | 3 |
| multinucleate cell | 5.05e-08 | 1 |
| myotube | 5.05e-08 | 1 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| neural nucleus | 1.68e-18 | 9 |
| nucleus of brain | 1.68e-18 | 9 |
| regional part of diencephalon | 2.34e-16 | 4 |
| telencephalic nucleus | 1.55e-15 | 7 |
| pineal body | 2.80e-15 | 2 |
| regional part of epithalamus | 2.80e-15 | 2 |
| secretory circumventricular organ | 2.80e-15 | 2 |
| circumventricular organ | 2.80e-15 | 2 |
| epithalamus | 2.80e-15 | 2 |
| globus pallidus | 2.53e-14 | 2 |
Showing 1 to 10 of 54 entries
