FFCP PHASE1:Hg19::chr17:1646131..1646178,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5345 | |EntrezGene=5345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9075 | |HGNC=9075 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY78,C9JPV4 | |UniProt=C9JY78,C9JPV4 | ||
|association_with_transcript=0bp_to_ENST00000423861,ENST00000453723_5end | |association_with_transcript=0bp_to_ENST00000423861,ENST00000453723_5end | ||
|cluster_id=chr17:1646131..1646178,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_SERPINF2_5end | |description=CAGE_peak_1_at_SERPINF2_5end | ||
|id=chr17:1646131..1646178,+ | |id=chr17:1646131..1646178,+ | ||
|ontology_enrichment_celltype=CL:0000182;4.00e-17;12!CL:0002586;1.44e-09;3!CL:0000149;2.80e-07;4!CL:0000650;3.55e-07;2!CL:1000500;3.55e-07;2!CL:1000618;3.55e-07;2!CL:1001318;3.55e-07;2!CL:0002173;3.55e-07;2!CL:0000147;5.70e-07;14 | |ontology_enrichment_celltype=CL:0000181!7.50e-10!12;CL:0000417!7.50e-10!12;CL:0000668!7.50e-10!12;CL:0000414!7.50e-10!12;CL:0000412!7.50e-10!12;CL:0000182!7.50e-10!12;CL:1000507!1.74e-07!12;CL:1000494!1.74e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;4.00e-17;12!CL:0002586;1.44e-09;3!CL:0000149;2.80e-07;4!CL:0000650;3.55e-07;2!CL:1000500;3.55e-07;2!CL:1000618;3.55e-07;2!CL:1001318;3.55e-07;2!CL:0002173;3.55e-07;2!CL:0000147;5.70e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.00e-17,12;CL:0002586,1.35e-09,3;CL:0000149,2.68e-07,4;CL:0000650,3.44e-07,2;CL:1000500,3.44e-07,2;CL:1000618,3.44e-07,2;CL:1001318,3.44e-07,2;CL:0002173,3.44e-07,2;CL:0000147,5.67e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.40e-14;11!UBERON:0003104;5.20e-13;31!UBERON:0009497;5.87e-12;13!UBERON:0001041;7.30e-09;30!UBERON:0007297;9.91e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;5.91e-23;19!UBERON:0006925;5.91e-23;19!UBERON:0002423;9.80e-17;25!UBERON:0005172;4.43e-15;52!UBERON:0005173;4.43e-15;52!UBERON:0002365;8.89e-13;31!UBERON:0002330;8.89e-13;31!UBERON:0002368;4.07e-11;33!UBERON:0006947;1.01e-10;3!UBERON:0004054;1.01e-10;3!UBERON:0000966;6.19e-10;5!UBERON:0005388;6.19e-10;5!UBERON:0001802;6.19e-10;5!UBERON:0001781;1.44e-09;3!UBERON:0001782;1.44e-09;3!UBERON:0002417;2.71e-09;58!UBERON:0000916;2.71e-09;58!UBERON:0005904;3.95e-08;4!UBERON:0003567;3.55e-07;2!UBERON:0003838;3.55e-07;2!UBERON:0003586;3.55e-07;2!UBERON:0005169;3.55e-07;2!UBERON:0002321;3.55e-07;2!UBERON:0005215;3.55e-07;2!UBERON:0002303;3.55e-07;2!UBERON:0002319;3.55e-07;2!UBERON:0003135;4.57e-07;11!UBERON:0000949;4.92e-07;43!UBERON:0001007;8.04e-07;81 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-27!115;UBERON:0005172!1.45e-18!55;UBERON:0005173!1.45e-18!55;UBERON:0002417!7.01e-16!61;UBERON:0000916!7.01e-16!61;UBERON:0005057!5.57e-15!26;UBERON:0002107!8.56e-13!19;UBERON:0006925!8.56e-13!19;UBERON:0008836!8.56e-13!19;UBERON:0000481!1.63e-12!347;UBERON:0005177!2.24e-12!107;UBERON:0009854!1.17e-11!23;UBERON:0003103!5.41e-11!69;UBERON:0008835!1.41e-10!22;UBERON:0003894!1.41e-10!22;UBERON:0009856!6.96e-10!26;UBERON:0000062!7.52e-10!511;UBERON:0004921!7.69e-10!129;UBERON:0004185!7.69e-10!129;UBERON:0000489!8.33e-10!32;UBERON:0000466!1.23e-09!126;UBERON:0009569!1.35e-09!113;UBERON:0002113!2.72e-09!27;UBERON:0003918!2.72e-09!27;UBERON:0005095!2.72e-09!27;UBERON:0007687!2.72e-09!27;UBERON:0003887!3.67e-09!21;UBERON:0000966!6.19e-09!5;UBERON:0005388!6.19e-09!5;UBERON:0001802!6.19e-09!5;UBERON:0002365!6.40e-09!31;UBERON:0002330!6.40e-09!31;UBERON:0007499!6.64e-09!25;UBERON:0009497!6.64e-09!25;UBERON:0000015!6.64e-09!25;UBERON:0002423!6.64e-09!25;UBERON:0006235!6.64e-09!25;UBERON:0004161!6.64e-09!25;UBERON:0003104!1.47e-08!238;UBERON:0009142!1.47e-08!238;UBERON:0002368!1.74e-08!35;UBERON:0004876!4.93e-08!20;UBERON:0000483!6.77e-08!309;UBERON:0000922!8.37e-08!612;UBERON:0004111!1.05e-07!241;UBERON:0003929!1.12e-07!54;UBERON:0000119!1.14e-07!312;UBERON:0000080!1.65e-07!18;UBERON:0002120!1.65e-07!18;UBERON:0004875!1.65e-07!18;UBERON:0005721!1.65e-07!18;UBERON:0005754!1.65e-07!18;UBERON:0007297!1.65e-07!18;UBERON:0009773!1.74e-07!12;UBERON:0001231!1.74e-07!12;UBERON:0004810!1.74e-07!12;UBERON:0000477!2.11e-07!286;UBERON:0002530!2.63e-07!59;UBERON:0001048!2.83e-07!168;UBERON:0000025!3.24e-07!194;UBERON:0006554!3.35e-07!44;UBERON:0000468!3.37e-07!659;UBERON:0001007!4.11e-07!155;UBERON:0001555!4.11e-07!155;UBERON:0007026!4.11e-07!155;UBERON:0001008!6.00e-07!45;UBERON:0006947!8.80e-07!3;UBERON:0004054!8.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.91e-23;19!UBERON:0006925;5.91e-23;19!UBERON:0002423;9.80e-17;25!UBERON:0005172;4.43e-15;52!UBERON:0005173;4.43e-15;52!UBERON:0002365;8.89e-13;31!UBERON:0002330;8.89e-13;31!UBERON:0002368;4.07e-11;33!UBERON:0006947;1.01e-10;3!UBERON:0004054;1.01e-10;3!UBERON:0000966;6.19e-10;5!UBERON:0005388;6.19e-10;5!UBERON:0001802;6.19e-10;5!UBERON:0001781;1.44e-09;3!UBERON:0001782;1.44e-09;3!UBERON:0002417;2.71e-09;58!UBERON:0000916;2.71e-09;58!UBERON:0005904;3.95e-08;4!UBERON:0003567;3.55e-07;2!UBERON:0003838;3.55e-07;2!UBERON:0003586;3.55e-07;2!UBERON:0005169;3.55e-07;2!UBERON:0002321;3.55e-07;2!UBERON:0005215;3.55e-07;2!UBERON:0002303;3.55e-07;2!UBERON:0002319;3.55e-07;2!UBERON:0003135;4.57e-07;11!UBERON:0000949;4.92e-07;43!UBERON:0001007;8.04e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,9.63e-26,54;UBERON:0005173,9.63e-26,54;UBERON:0002107,6.04e-23,19;UBERON:0006925,6.04e-23,19;UBERON:0008836,6.04e-23,19;UBERON:0002417,1.54e-22,60;UBERON:0000916,1.54e-22,60;UBERON:0008835,2.07e-19,22;UBERON:0003894,2.07e-19,22;UBERON:0009854,1.94e-18,23;UBERON:0005177,2.96e-17,101;UBERON:0007499,9.95e-17,25;UBERON:0009497,9.95e-17,25;UBERON:0000015,9.95e-17,25;UBERON:0002423,9.95e-17,25;UBERON:0006235,9.95e-17,25;UBERON:0004161,9.95e-17,25;UBERON:0009856,5.67e-16,26;UBERON:0009569,1.23e-13,112;UBERON:0002365,6.25e-13,31;UBERON:0002330,6.25e-13,31;UBERON:0004921,2.27e-12,118;UBERON:0003929,7.84e-12,54;UBERON:0002368,3.95e-11,35;UBERON:0006947,1.04e-10,3;UBERON:0004054,1.04e-10,3;UBERON:0001782,1.35e-09,3;UBERON:0005424,1.35e-09,3;UBERON:0005911,1.56e-09,82;UBERON:0003104,2.43e-09,160;UBERON:0009142,2.43e-09,160;UBERON:0002530,4.56e-09,59;UBERON:0003887,7.18e-09,12;UBERON:0001007,7.22e-09,145;UBERON:0001555,7.22e-09,145;UBERON:0007026,7.22e-09,145;UBERON:0000966,2.69e-08,6;UBERON:0005388,2.69e-08,6;UBERON:0001802,2.69e-08,6;UBERON:0007023,2.78e-08,114;UBERON:0002113,3.29e-08,26;UBERON:0003918,3.29e-08,26;UBERON:0011143,3.29e-08,26;UBERON:0005095,3.29e-08,26;UBERON:0007687,3.29e-08,26;UBERON:0001048,3.50e-08,160;UBERON:0000489,4.03e-08,31;UBERON:0005904,4.05e-08,4;UBERON:0002100,4.16e-08,199;UBERON:0000949,4.75e-08,45;UBERON:0004119,1.85e-07,160;UBERON:0000925,1.85e-07,160;UBERON:0006595,1.85e-07,160;UBERON:0001041,1.89e-07,87;UBERON:0001781,2.68e-07,4;UBERON:0003567,3.44e-07,2;UBERON:0003838,3.44e-07,2;UBERON:0003586,3.44e-07,2;UBERON:0005169,3.44e-07,2;UBERON:0002321,3.44e-07,2;UBERON:0005215,3.44e-07,2;UBERON:0002303,3.44e-07,2;UBERON:0002319,3.44e-07,2;UBERON:0003135,4.28e-07,11;UBERON:0006554,5.15e-07,47;UBERON:0004876,5.88e-07,11;UBERON:0001008,8.12e-07,48 | |||
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|short_description=p1@SERPINF2 | |short_description=p1@SERPINF2 | ||
}} | }} |
Latest revision as of 20:18, 18 September 2015
Short description: | p1@SERPINF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINF2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000423861, ENST00000453723_5end |
EntrezGene: | SERPINF2 |
HGNC: | 9075 |
UniProt: | C9JY78C9JPV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.00e-17 | 12 |
retinal pigment epithelial cell | 1.35e-09 | 3 |
visual pigment cell | 2.68e-07 | 4 |
mesangial cell | 3.44e-07 | 2 |
kidney interstitial cell | 3.44e-07 | 2 |
juxtaglomerular complex cell | 3.44e-07 | 2 |
renal interstitial pericyte | 3.44e-07 | 2 |
extraglomerular mesangial cell | 3.44e-07 | 2 |
pigment cell | 5.67e-07 | 14 |