FFCP PHASE1:Hg19::chr17:1648250..1648286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5345 | |EntrezGene=5345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9075 | |HGNC=9075 | ||
|TSSclassifier=strong | |||
|UniProt=P08697 | |UniProt=P08697 | ||
|association_with_transcript=0bp_to_D00174_5end | |association_with_transcript=0bp_to_D00174_5end | ||
|cluster_id=chr17:1648250..1648286,+ | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_3_at_SERPINF2_5end | |description=CAGE_peak_3_at_SERPINF2_5end | ||
|id=chr17:1648250..1648286,+ | |id=chr17:1648250..1648286,+ | ||
|ontology_enrichment_celltype=CL:0000136!3.12e-08!15 | |ontology_enrichment_celltype=CL:0000136!3.12e-08!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.50e-10;2!UBERON:0006603;2.75e-10;65!UBERON:0005062;7.04e-10;4!UBERON:0007284;7.04e-10;4!UBERON:0006965;4.53e-09;2!UBERON:0003104;1.91e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.73e-64!115;UBERON:0002619!4.51e-17!22;UBERON:0003080!3.27e-16!42;UBERON:0002780!5.99e-15!41;UBERON:0001890!5.99e-15!41;UBERON:0006240!5.99e-15!41;UBERON:0001950!1.40e-14!20;UBERON:0000956!1.44e-14!25;UBERON:0000203!1.44e-14!25;UBERON:0001049!1.40e-13!57;UBERON:0005068!1.40e-13!57;UBERON:0006241!1.40e-13!57;UBERON:0007135!1.40e-13!57;UBERON:0001869!2.28e-13!32;UBERON:0001893!2.56e-12!34;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0003075!3.73e-12!86;UBERON:0007284!3.73e-12!86;UBERON:0002346!4.40e-12!90;UBERON:0002616!9.78e-12!59;UBERON:0002791!1.87e-11!33;UBERON:0003056!2.68e-10!61;UBERON:0005743!7.21e-10!86;UBERON:0000955!7.63e-10!69;UBERON:0006238!7.63e-10!69;UBERON:0001017!8.35e-10!82;UBERON:0000062!6.68e-09!511;UBERON:0004111!6.77e-09!241;UBERON:0000477!8.34e-09!286;UBERON:0000481!1.99e-08!347;UBERON:0000073!3.00e-08!94;UBERON:0001016!3.00e-08!94;UBERON:0000475!1.45e-07!365;UBERON:0006947!2.02e-07!3;UBERON:0004054!2.02e-07!3;UBERON:0000025!3.71e-07!194;UBERON:0000468!4.14e-07!659;UBERON:0000467!6.48e-07!625;UBERON:0000480!7.29e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!3.73e-64!115;UBERON:0002619!4.51e-17!22;UBERON:0003080!3.27e-16!42;UBERON:0002780!5.99e-15!41;UBERON:0001890!5.99e-15!41;UBERON:0006240!5.99e-15!41;UBERON:0001950!1.40e-14!20;UBERON:0000956!1.44e-14!25;UBERON:0000203!1.44e-14!25;UBERON:0001049!1.40e-13!57;UBERON:0005068!1.40e-13!57;UBERON:0006241!1.40e-13!57;UBERON:0007135!1.40e-13!57;UBERON:0001869!2.28e-13!32;UBERON:0001893!2.56e-12!34;UBERON:0002020!2.58e-12!34;UBERON:0003528!2.58e-12!34;UBERON:0003075!3.73e-12!86;UBERON:0007284!3.73e-12!86;UBERON:0002346!4.40e-12!90;UBERON:0002616!9.78e-12!59;UBERON:0002791!1.87e-11!33;UBERON:0003056!2.68e-10!61;UBERON:0005743!7.21e-10!86;UBERON:0000955!7.63e-10!69;UBERON:0006238!7.63e-10!69;UBERON:0001017!8.35e-10!82;UBERON:0000062!6.68e-09!511;UBERON:0004111!6.77e-09!241;UBERON:0000477!8.34e-09!286;UBERON:0000481!1.99e-08!347;UBERON:0000073!3.00e-08!94;UBERON:0001016!3.00e-08!94;UBERON:0000475!1.45e-07!365;UBERON:0006947!2.02e-07!3;UBERON:0004054!2.02e-07!3;UBERON:0000025!3.71e-07!194;UBERON:0000468!4.14e-07!659;UBERON:0000467!6.48e-07!625;UBERON:0000480!7.29e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.19e-14;3!UBERON:0004054;1.19e-14;3!UBERON:0003135;1.92e-14;11!UBERON:0003978;5.20e-13;3!UBERON:0000946;5.20e-13;3!UBERON:0005904;4.28e-11;4!UBERON:0007023;1.35e-10;114!UBERON:0002081;9.81e-10;2!UBERON:0002133;3.17e-09;2!UBERON:0003101;4.27e-09;22!UBERON:0000079;4.27e-09;22!UBERON:0004151;9.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-33,114;UBERON:0006947,1.19e-14,3;UBERON:0004054,1.19e-14,3;UBERON:0003135,1.94e-14,11;UBERON:0003978,5.77e-13,3;UBERON:0009751,5.77e-13,3;UBERON:0000946,5.77e-13,3;UBERON:0002523,5.77e-13,3;UBERON:0005983,5.77e-13,3;UBERON:0002165,5.77e-13,3;UBERON:0002062,5.77e-13,3;UBERON:0007280,5.77e-13,3;UBERON:0005904,4.28e-11,4;UBERON:0002081,9.00e-10,2;UBERON:0010227,9.00e-10,2;UBERON:0002133,3.68e-09,2;UBERON:0003101,4.14e-09,22;UBERON:0000079,4.14e-09,22;UBERON:0004151,8.94e-07,3 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.845726424575827,0,1.78784437770915,0,0,0.631719873426831,5.74608382039645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,10.8110993834539,11.2250082269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,3.94573622547734,0,0,0,0.649376687132959,0,0,0,7.97499532978273,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56526937059684,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,68.6576860957939,1.20990716048664,0,16.3021375441499,0,0,0,0,0,0,0,0,0,0,0,30.0529869376292,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,2.7499250881402,3.58936512288407,0.599037001496973,0.858452096273142,3.12440040418622,0.470284307407084,0,0,0,0,0.0674035438541849,0,0,2.38568906942791,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.630445658393585,0.157363764404994,0,0,0,5.71756261098694,0,0,0,0,0,0,0,0,0,15.3879845361987,2.65013777824443,0,0.13223260174269,0,0,1.38823636338003,0,0,35.2277875486485,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0.244052529803926,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,2.8339315265117,1.11743701340006,0.41023272848151,0,0.207471757392654,0.807378228159255,0,0,0,0,0,0,0,0,4.36219904425692,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.380494861163441,0,0,3.47347824872506,0,0,0.535701835878287,0,0.606965604236632,1.59363533945908,0.266107110487916,0,0,0,0.263091094251396,0,0,2.90424443546902,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0.17071847709395,0,0,0,0,82.5604747872312,0,0,0,0,0,0,1.94228651156368,3.18254701254366,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,40.3900461503216,13.6661706379651,0,0,0,0,0,1.61394257169231,0,5.09177266225319,0.404234377916439,0.217716747896961,0.342233301085281,0.606168477131288,3.58611026963382,0.99798106963804,0,0,0,0,0,0.488965776731466,0,3.99454064511308,1.61019034872821,0 | |phase1_expression=0.54503513781167,0.856402095563933,0.845726424575827,0,1.78784437770915,0,0,0.631719873426831,5.74608382039645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,10.8110993834539,11.2250082269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93016358543788,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0.276283915531148,0,0,0,0,0,0,0,3.94573622547734,0,0,0,0.649376687132959,0,0,0,7.97499532978273,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56526937059684,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,68.6576860957939,1.20990716048664,0,16.3021375441499,0,0,0,0,0,0,0,0,0,0,0,30.0529869376292,0,0,0,0,1.16386819786103,0,0.90392296312213,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,2.7499250881402,3.58936512288407,0.599037001496973,0.858452096273142,3.12440040418622,0.470284307407084,0,0,0,0,0.0674035438541849,0,0,2.38568906942791,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0.630445658393585,0.157363764404994,0,0,0,5.71756261098694,0,0,0,0,0,0,0,0,0,15.3879845361987,2.65013777824443,0,0.13223260174269,0,0,1.38823636338003,0,0,35.2277875486485,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0.244052529803926,0.500763722825999,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,2.8339315265117,1.11743701340006,0.41023272848151,0,0.207471757392654,0.807378228159255,0,0,0,0,0,0,0,0,4.36219904425692,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.380494861163441,0,0,3.47347824872506,0,0,0.535701835878287,0,0.606965604236632,1.59363533945908,0.266107110487916,0,0,0,0.263091094251396,0,0,2.90424443546902,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0.17071847709395,0,0,0,0,82.5604747872312,0,0,0,0,0,0,1.94228651156368,3.18254701254366,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0,0.4226557275834,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0.203974470572744,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,40.3900461503216,13.6661706379651,0,0,0,0,0,1.61394257169231,0,5.09177266225319,0.404234377916439,0.217716747896961,0.342233301085281,0.606168477131288,3.58611026963382,0.99798106963804,0,0,0,0,0,0.488965776731466,0,3.99454064511308,1.61019034872821,0 | ||
|short_description=p3@SERPINF2 | |short_description=p3@SERPINF2 | ||
}} | }} |
Latest revision as of 20:19, 18 September 2015
Short description: | p3@SERPINF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SERPINF2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 0bp_to_D00174_5end |
EntrezGene: | SERPINF2 |
HGNC: | 9075 |
UniProt: | P08697 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-33 | 114 |
male genital duct | 1.19e-14 | 3 |
internal male genitalia | 1.19e-14 | 3 |
male reproductive organ | 1.94e-14 | 11 |
valve | 5.77e-13 | 3 |
cardiac mesenchyme | 5.77e-13 | 3 |
cardial valve | 5.77e-13 | 3 |
tunica intima | 5.77e-13 | 3 |
heart layer | 5.77e-13 | 3 |
endocardium | 5.77e-13 | 3 |
endocardial cushion | 5.77e-13 | 3 |
presumptive endocardium | 5.77e-13 | 3 |
duct of male reproductive system | 4.28e-11 | 4 |
cardiac atrium | 9.00e-10 | 2 |
future cardiac atrium | 9.00e-10 | 2 |
atrioventricular valve | 3.68e-09 | 2 |
male organism | 4.14e-09 | 22 |
male reproductive system | 4.14e-09 | 22 |
cardiac chamber | 8.94e-07 | 3 |