FFCP PHASE1:Hg19::chr12:52300746..52300751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000551576_5end | |association_with_transcript=54bp_to_ENST00000551576_5end | ||
|cluster_id=chr12:52300746..52300751,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_10_at_ACVRL1_5end | |description=CAGE_peak_10_at_ACVRL1_5end | ||
|id=chr12:52300746..52300751,+ | |id=chr12:52300746..52300751,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.40e-42!24;CL:0000115!8.86e-37!35;CL:0000071!2.30e-32!18;CL:0002546!2.30e-32!18;CL:0002078!2.98e-27!44;CL:0000213!6.78e-19!57;CL:0000215!6.78e-19!57;CL:1000413!1.32e-17!9;CL:0000222!2.82e-13!119;CL:0002544!2.78e-12!6;CL:0002543!1.85e-11!6;CL:0005020!5.42e-11!6;CL:0002138!5.42e-11!6;CL:0005022!5.42e-11!6;CL:0002551!1.88e-07!6;CL:1000306!7.56e-07!4;CL:0002547!7.56e-07!4 | |ontology_enrichment_celltype=CL:0002139!7.40e-42!24;CL:0000115!8.86e-37!35;CL:0000071!2.30e-32!18;CL:0002546!2.30e-32!18;CL:0002078!2.98e-27!44;CL:0000213!6.78e-19!57;CL:0000215!6.78e-19!57;CL:1000413!1.32e-17!9;CL:0000222!2.82e-13!119;CL:0002544!2.78e-12!6;CL:0002543!1.85e-11!6;CL:0005020!5.42e-11!6;CL:0002138!5.42e-11!6;CL:0005022!5.42e-11!6;CL:0002551!1.88e-07!6;CL:1000306!7.56e-07!4;CL:0002547!7.56e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.10e-92;24!CL:0000071;1.75e-79;18!CL:0000115;6.59e-71;36!CL:1000413;2.59e-52;9!CL:0002078;4.00e-41;45!CL:0002544;2.48e-35;6!CL:0000213;2.75e-29;58!CL:0000215;2.75e-29;58!CL:0002543;1.92e-23;6!CL:0002138;3.25e-15;6!CL:0002545;3.18e-13;2!CL:0000076;7.09e-13;63!CL:0002188;1.59e-11;5!CL:0002551;4.90e-09;6!CL:0002144;1.28e-08;3!CL:1000746;2.34e-08;7!CL:1000612;2.34e-08;7!CL:0002618;2.36e-08;3!CL:0002591;7.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.16e-92,24;CL:0000115,1.39e-80,36;CL:0000071,1.26e-79,18;CL:0002546,1.26e-79,18;CL:0002078,1.63e-63,45;CL:1000413,2.46e-52,9;CL:0000213,3.33e-48,58;CL:0000215,3.33e-48,58;CL:0002544,2.15e-35,6;CL:0000222,9.22e-25,121;CL:0002543,1.71e-23,6;CL:0000076,2.56e-20,63;CL:0005020,4.16e-15,6;CL:0002138,4.16e-15,6;CL:0005022,4.16e-15,6;CL:0002545,3.28e-13,2;CL:0002188,1.71e-11,5;CL:0002321,3.43e-09,250;CL:0002551,3.92e-09,6;CL:0002144,1.15e-08,3;CL:1000746,2.46e-08,7;CL:1000612,2.46e-08,7;CL:0002618,2.55e-08,3;CL:0000066,2.50e-07,253;CL:0002591,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-79;18!CL:0005022;3.25e-15;6!CL:0000222;6.83e-09;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.30e-32!18;UBERON:0004638!2.30e-32!18;UBERON:0004852!2.30e-32!18;UBERON:0000487!2.37e-25!22;UBERON:0000055!4.43e-25!69;UBERON:0002049!8.07e-22!79;UBERON:0007798!8.07e-22!79;UBERON:0006914!1.41e-21!25;UBERON:0001009!4.17e-20!113;UBERON:0004872!2.76e-19!84;UBERON:0004535!1.01e-18!110;UBERON:0001981!3.36e-18!60;UBERON:0007500!3.36e-18!60;UBERON:0004537!3.36e-18!60;UBERON:0006965!3.36e-18!60;UBERON:0003915!1.32e-17!9;UBERON:0004700!1.32e-17!9;UBERON:0001917!1.32e-17!9;UBERON:0003914!1.59e-14!118;UBERON:0004111!4.12e-14!241;UBERON:0007023!3.99e-12!115;UBERON:0000025!5.81e-12!194;UBERON:0000483!2.69e-11!309;UBERON:0000119!5.21e-11!312;UBERON:0000477!7.83e-11!286;UBERON:0001473!9.82e-11!8;UBERON:0004536!9.82e-11!8;UBERON:0006558!9.82e-11!8;UBERON:0002465!2.32e-10!10;UBERON:0001637!1.01e-09!42;UBERON:0003509!1.01e-09!42;UBERON:0004572!1.01e-09!42;UBERON:0000947!1.79e-08!21;UBERON:0010191!1.79e-08!21;UBERON:0000468!1.94e-07!659;UBERON:0000467!2.10e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0001638!2.77e-07!9;UBERON:0003920!2.77e-07!9;UBERON:0004582!2.77e-07!9;UBERON:0000415!7.56e-07!4;UBERON:0007240!7.56e-07!4;UBERON:0005742!7.56e-07!4;UBERON:0005734!7.56e-07!4;UBERON:0004664!7.56e-07!4;UBERON:0004663!7.56e-07!4;UBERON:0007100!9.85e-07!27 | |ontology_enrichment_uberon=UBERON:0001986!2.30e-32!18;UBERON:0004638!2.30e-32!18;UBERON:0004852!2.30e-32!18;UBERON:0000487!2.37e-25!22;UBERON:0000055!4.43e-25!69;UBERON:0002049!8.07e-22!79;UBERON:0007798!8.07e-22!79;UBERON:0006914!1.41e-21!25;UBERON:0001009!4.17e-20!113;UBERON:0004872!2.76e-19!84;UBERON:0004535!1.01e-18!110;UBERON:0001981!3.36e-18!60;UBERON:0007500!3.36e-18!60;UBERON:0004537!3.36e-18!60;UBERON:0006965!3.36e-18!60;UBERON:0003915!1.32e-17!9;UBERON:0004700!1.32e-17!9;UBERON:0001917!1.32e-17!9;UBERON:0003914!1.59e-14!118;UBERON:0004111!4.12e-14!241;UBERON:0007023!3.99e-12!115;UBERON:0000025!5.81e-12!194;UBERON:0000483!2.69e-11!309;UBERON:0000119!5.21e-11!312;UBERON:0000477!7.83e-11!286;UBERON:0001473!9.82e-11!8;UBERON:0004536!9.82e-11!8;UBERON:0006558!9.82e-11!8;UBERON:0002465!2.32e-10!10;UBERON:0001637!1.01e-09!42;UBERON:0003509!1.01e-09!42;UBERON:0004572!1.01e-09!42;UBERON:0000947!1.79e-08!21;UBERON:0010191!1.79e-08!21;UBERON:0000468!1.94e-07!659;UBERON:0000467!2.10e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0001638!2.77e-07!9;UBERON:0003920!2.77e-07!9;UBERON:0004582!2.77e-07!9;UBERON:0000415!7.56e-07!4;UBERON:0007240!7.56e-07!4;UBERON:0005742!7.56e-07!4;UBERON:0005734!7.56e-07!4;UBERON:0004664!7.56e-07!4;UBERON:0004663!7.56e-07!4;UBERON:0007100!9.85e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-79;18!UBERON:0001986;1.75e-79;18!UBERON:0004852;1.75e-79;18!UBERON:0000487;2.01e-64;22!UBERON:0006914;2.74e-56;25!UBERON:0003915;2.59e-52;9!UBERON:0004700;2.59e-52;9!UBERON:0001917;2.59e-52;9!UBERON:0000490;1.43e-38;33!UBERON:0000055;2.60e-19;65!UBERON:0007500;1.42e-17;56!UBERON:0001981;1.42e-17;56!UBERON:0004537;1.42e-17;56!UBERON:0001638;1.39e-15;9!UBERON:0003920;1.39e-15;9!UBERON:0004582;1.39e-15;9!UBERON:0005800;3.18e-13;2!UBERON:0001515;3.18e-13;2!UBERON:0002049;3.61e-13;75!UBERON:0007798;3.61e-13;75!UBERON:0003914;6.50e-12;74!UBERON:0001473;1.88e-11;8!UBERON:0004536;1.88e-11;8!UBERON:0006558;1.88e-11;8!UBERON:0001637;2.11e-11;42!UBERON:0003509;2.11e-11;42!UBERON:0004572;2.11e-11;42!UBERON:0000025;1.33e-10;93!UBERON:0000947;1.07e-09;21!UBERON:0010191;1.07e-09;21!UBERON:0004535;2.85e-09;109!UBERON:0002465;3.45e-09;10!UBERON:0001009;3.92e-09;112!UBERON:0010523;1.28e-08;3!UBERON:0001915;1.28e-08;3!UBERON:0001982;1.28e-08;3!UBERON:0000074;2.34e-08;7!UBERON:0001229;2.34e-08;7!UBERON:0004111;2.95e-08;130!UBERON:0002134;2.44e-07;1!UBERON:0005208;2.44e-07;1!UBERON:0004145;2.44e-07;1!UBERON:0005946;2.44e-07;1!UBERON:0005965;2.44e-07;1!UBERON:0002078;2.44e-07;1!UBERON:0002171;3.60e-07;1!UBERON:0006518;3.60e-07;1!UBERON:0008949;3.60e-07;1!UBERON:0000101;3.60e-07;1!UBERON:0002167;3.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.26e-79,18;UBERON:0001986,1.26e-79,18;UBERON:0004852,1.26e-79,18;UBERON:0000487,1.54e-64,22;UBERON:0006914,2.17e-56,25;UBERON:0003915,2.46e-52,9;UBERON:0004700,2.46e-52,9;UBERON:0001917,2.46e-52,9;UBERON:0000055,1.87e-36,68;UBERON:0002049,3.50e-31,78;UBERON:0007798,3.50e-31,78;UBERON:0007500,4.02e-28,59;UBERON:0001981,4.02e-28,59;UBERON:0004537,4.02e-28,59;UBERON:0006965,4.02e-28,59;UBERON:0004535,2.09e-25,109;UBERON:0001009,1.36e-24,112;UBERON:0004872,1.27e-23,83;UBERON:0003914,1.74e-21,117;UBERON:0001638,1.29e-15,9;UBERON:0003920,1.29e-15,9;UBERON:0004582,1.29e-15,9;UBERON:0004111,1.59e-14,240;UBERON:0000025,1.12e-13,192;UBERON:0005800,3.28e-13,2;UBERON:0001515,3.28e-13,2;UBERON:0000490,9.32e-13,148;UBERON:0001637,2.66e-12,42;UBERON:0003509,2.66e-12,42;UBERON:0004572,2.66e-12,42;UBERON:0003081,2.23e-11,203;UBERON:0001473,2.25e-11,8;UBERON:0004536,2.25e-11,8;UBERON:0006558,2.25e-11,8;UBERON:0000947,1.03e-09,21;UBERON:0010191,1.03e-09,21;UBERON:0000483,3.08e-09,306;UBERON:0002465,3.98e-09,10;UBERON:0000119,4.29e-09,309;UBERON:0000926,9.48e-09,315;UBERON:0004120,9.48e-09,315;UBERON:0006603,9.48e-09,315;UBERON:0010523,1.15e-08,3;UBERON:0001915,1.15e-08,3;UBERON:0001982,1.15e-08,3;UBERON:0004145,1.29e-08,3;UBERON:0010532,2.46e-08,7;UBERON:0000074,2.46e-08,7;UBERON:0001229,2.46e-08,7;UBERON:0001230,2.46e-08,7;UBERON:0003220,2.46e-08,7;UBERON:0005749,2.46e-08,7;UBERON:0004199,2.46e-08,7;UBERON:0004209,2.46e-08,7;UBERON:0004198,2.46e-08,7;UBERON:0002134,2.37e-07,1;UBERON:0005208,2.37e-07,1;UBERON:0005946,2.37e-07,1;UBERON:0005965,2.37e-07,1;UBERON:0002078,2.37e-07,1;UBERON:0005103,2.42e-07,8;UBERON:0000083,2.42e-07,8;UBERON:0009201,2.42e-07,8;UBERON:0006553,2.42e-07,8;UBERON:0003074,2.42e-07,8;UBERON:0003060,2.42e-07,8;UBERON:0002171,3.20e-07,1;UBERON:0006518,3.20e-07,1;UBERON:0008949,3.20e-07,1;UBERON:0000101,3.20e-07,1;UBERON:0002167,3.20e-07,1 | |||
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|short_description=p10@ACVRL1 | |short_description=p10@ACVRL1 | ||
}} | }} |
Latest revision as of 20:41, 18 September 2015
Short description: | p10@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ACVRL1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 54bp_to_ENST00000551576_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.16e-92 | 24 |
endothelial cell | 1.39e-80 | 36 |
blood vessel endothelial cell | 1.26e-79 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.26e-79 | 18 |
meso-epithelial cell | 1.63e-63 | 45 |
endothelial cell of artery | 2.46e-52 | 9 |
lining cell | 3.33e-48 | 58 |
barrier cell | 3.33e-48 | 58 |
aortic endothelial cell | 2.15e-35 | 6 |
mesodermal cell | 9.22e-25 | 121 |
vein endothelial cell | 1.71e-23 | 6 |
squamous epithelial cell | 2.56e-20 | 63 |
lymphangioblast | 4.16e-15 | 6 |
endothelial cell of lymphatic vessel | 4.16e-15 | 6 |
vascular lymphangioblast | 4.16e-15 | 6 |
thoracic aorta endothelial cell | 3.28e-13 | 2 |
glomerular endothelial cell | 1.71e-11 | 5 |
embryonic cell | 3.43e-09 | 250 |
fibroblast of dermis | 3.92e-09 | 6 |
capillary endothelial cell | 1.15e-08 | 3 |
glomerular cell | 2.46e-08 | 7 |
kidney corpuscule cell | 2.46e-08 | 7 |
endothelial cell of umbilical vein | 2.55e-08 | 3 |
epithelial cell | 2.50e-07 | 253 |
smooth muscle cell of the pulmonary artery | 8.18e-07 | 1 |