FFCP PHASE1:Hg19::chr7:47492782..47492881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64759 | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |HGNC=21616 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWN9 | |UniProt=C9JWN9 | ||
|association_with_transcript=0bp_to_ENST00000413551_5end | |association_with_transcript=0bp_to_ENST00000413551_5end | ||
|cluster_id=chr7:47492782..47492881,- | |||
|description=CAGE_peak_4_at_TNS3_5end | |description=CAGE_peak_4_at_TNS3_5end | ||
|id=chr7:47492782..47492881,- | |id=chr7:47492782..47492881,- | ||
|ontology_enrichment_celltype=CL:0000115!6.02e-14!35;CL:0002078!3.05e-13!44;CL:0002139!6.10e-13!24;CL:0000071!5.43e-12!18;CL:0002546!5.43e-12!18;CL:0000222!6.20e-12!119;CL:0000213!2.19e-09!57;CL:0000215!2.19e-09!57 | |ontology_enrichment_celltype=CL:0000115!6.02e-14!35;CL:0002078!3.05e-13!44;CL:0002139!6.10e-13!24;CL:0000071!5.43e-12!18;CL:0002546!5.43e-12!18;CL:0000222!6.20e-12!119;CL:0000213!2.19e-09!57;CL:0000215!2.19e-09!57 | ||
|ontology_enrichment_celltype_v019=CL:0000071;4.86e-17;18!CL:0000115;3.24e-15;36!CL:0002139;4.36e-15;24!CL:0002078;1.21e-10;45!CL:1000413;5.47e-09;9!CL:0002543;3.67e-07;6!CL:0002544;7.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0000071;4.86e-17;18!CL:0000115;3.24e-15;36!CL:0002139;4.36e-15;24!CL:0002078;1.21e-10;45!CL:1000413;5.47e-09;9!CL:0002543;3.67e-07;6!CL:0002544;7.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.48e-18,36;CL:0000071,5.15e-17,18;CL:0002546,5.15e-17,18;CL:0002078,8.79e-16,45;CL:0002139,3.40e-15,24;CL:0000222,1.27e-10,121;CL:1000413,6.00e-09,9;CL:0000213,8.43e-09,58;CL:0000215,8.43e-09,58;CL:0002543,3.82e-07,6;CL:0002544,7.46e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;4.86e-17;18 | |ontology_enrichment_development_v019=CL:0002546;4.86e-17;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.47e-13!69;UBERON:0000467!3.83e-12!625;UBERON:0002049!4.74e-12!79;UBERON:0007798!4.74e-12!79;UBERON:0004111!5.00e-12!241;UBERON:0000468!5.30e-12!659;UBERON:0001986!5.43e-12!18;UBERON:0004638!5.43e-12!18;UBERON:0004852!5.43e-12!18;UBERON:0000480!5.79e-12!626;UBERON:0000483!8.82e-12!309;UBERON:0000119!2.07e-11!312;UBERON:0001981!6.32e-11!60;UBERON:0007500!6.32e-11!60;UBERON:0004537!6.32e-11!60;UBERON:0006965!6.32e-11!60;UBERON:0000487!1.27e-10!22;UBERON:0000477!3.54e-10!286;UBERON:0000475!6.07e-10!365;UBERON:0002100!1.28e-09!216;UBERON:0006914!6.70e-09!25;UBERON:0003914!1.26e-08!118;UBERON:0004872!3.61e-08!84;UBERON:0003104!3.62e-08!238;UBERON:0009142!3.62e-08!238;UBERON:0007023!3.92e-08!115;UBERON:0000481!4.71e-08!347;UBERON:0005256!1.06e-07!143;UBERON:0000486!2.72e-07!82;UBERON:0000490!2.99e-07!138;UBERON:0001637!5.31e-07!42;UBERON:0003509!5.31e-07!42;UBERON:0004572!5.31e-07!42;UBERON:0000025!6.39e-07!194;UBERON:0000464!8.05e-07!104 | |ontology_enrichment_uberon=UBERON:0000055!8.47e-13!69;UBERON:0000467!3.83e-12!625;UBERON:0002049!4.74e-12!79;UBERON:0007798!4.74e-12!79;UBERON:0004111!5.00e-12!241;UBERON:0000468!5.30e-12!659;UBERON:0001986!5.43e-12!18;UBERON:0004638!5.43e-12!18;UBERON:0004852!5.43e-12!18;UBERON:0000480!5.79e-12!626;UBERON:0000483!8.82e-12!309;UBERON:0000119!2.07e-11!312;UBERON:0001981!6.32e-11!60;UBERON:0007500!6.32e-11!60;UBERON:0004537!6.32e-11!60;UBERON:0006965!6.32e-11!60;UBERON:0000487!1.27e-10!22;UBERON:0000477!3.54e-10!286;UBERON:0000475!6.07e-10!365;UBERON:0002100!1.28e-09!216;UBERON:0006914!6.70e-09!25;UBERON:0003914!1.26e-08!118;UBERON:0004872!3.61e-08!84;UBERON:0003104!3.62e-08!238;UBERON:0009142!3.62e-08!238;UBERON:0007023!3.92e-08!115;UBERON:0000481!4.71e-08!347;UBERON:0005256!1.06e-07!143;UBERON:0000486!2.72e-07!82;UBERON:0000490!2.99e-07!138;UBERON:0001637!5.31e-07!42;UBERON:0003509!5.31e-07!42;UBERON:0004572!5.31e-07!42;UBERON:0000025!6.39e-07!194;UBERON:0000464!8.05e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.86e-17;18!UBERON:0001986;4.86e-17;18!UBERON:0004852;4.86e-17;18!UBERON:0000487;1.46e-14;22!UBERON:0006914;5.37e-12;25!UBERON:0000490;1.85e-09;33!UBERON:0003915;5.47e-09;9!UBERON:0004700;5.47e-09;9!UBERON:0001917;5.47e-09;9!UBERON:0003914;7.29e-08;74!UBERON:0000025;3.16e-07;93 | |ontology_enrichment_uberon_v019=UBERON:0004638;4.86e-17;18!UBERON:0001986;4.86e-17;18!UBERON:0004852;4.86e-17;18!UBERON:0000487;1.46e-14;22!UBERON:0006914;5.37e-12;25!UBERON:0000490;1.85e-09;33!UBERON:0003915;5.47e-09;9!UBERON:0004700;5.47e-09;9!UBERON:0001917;5.47e-09;9!UBERON:0003914;7.29e-08;74!UBERON:0000025;3.16e-07;93 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.15e-17,18;UBERON:0001986,5.15e-17,18;UBERON:0004852,5.15e-17,18;UBERON:0000487,1.57e-14,22;UBERON:0000055,2.36e-13,68;UBERON:0007500,2.98e-12,59;UBERON:0001981,2.98e-12,59;UBERON:0004537,2.98e-12,59;UBERON:0006965,2.98e-12,59;UBERON:0006914,5.69e-12,25;UBERON:0003914,4.50e-11,117;UBERON:0002049,9.79e-11,78;UBERON:0007798,9.79e-11,78;UBERON:0000490,3.41e-10,148;UBERON:0002100,3.43e-10,199;UBERON:0004872,1.87e-09,83;UBERON:0003915,6.00e-09,9;UBERON:0004700,6.00e-09,9;UBERON:0001917,6.00e-09,9;UBERON:0004111,9.78e-09,240;UBERON:0000483,3.37e-08,306;UBERON:0000119,7.00e-08,309;UBERON:0000926,2.11e-07,315;UBERON:0004120,2.11e-07,315;UBERON:0006603,2.11e-07,315;UBERON:0006555,2.87e-07,16;UBERON:0004819,2.87e-07,16;UBERON:0006554,3.44e-07,47;UBERON:0001009,3.90e-07,112;UBERON:0000486,5.27e-07,83;UBERON:0001008,6.78e-07,48 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0,0,0,0.631719873426831,0,0.982935746006035,2.79120467188971,5.02415155899396,6.59417445571134,0.123766352960047,1.32558950291166,0.672325146451775,0,0,0.487932798790507,1.35433163884467,3.26401105990805,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,3.91567694411725,0.369754010166788,0,0,0,0,0,0,28.6611807027103,17.8141516310439,30.1363414131998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,0.434539556882471,0.795285947051099,1.94653948121054,0.283604451492204,0.443458794925128,0.263504357079378,2.16115474571226,1.09288586487763,0,0.97364218096405,3.30846500868608,2.39324328933957,0,0,0,7.15544666520138,12.0432843314857,10.4142150482278,2.26123176769604,1.25849830862972,5.50236083880135,8.15080369493561,2.32575083252396,0.71153252537342,0.33472061276467,7.25092770796465,5.32190474002959,3.90499292077071,2.94130464276695,11.3419872703446,3.03619076165871,3.81699933464489,9.34675288011574,13.7984973719295,14.2389848935219,10.6257011479636,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0.709336764396714,0,0,4.44001587150888,0,0.134710672069688,0,0,0,0.234321431833797,5.30672130611545,10.2684927878001,13.4503812496621,0.23486899728753,0,0.280901613404497,16.1281795291366,0.982674538494144,9.60929764934619,0,0,9.10161361938026,5.74894513452991,0.673344455816265,0.375355559615893,7.48073111807294,0,0,0,0,0.89694817844431,0.213557388818567,1.48352330811693,1.20036438433761,1.44273540933814,0.772921620136887,0.930584281657949,0.337552664482532,0.292311015483596,0.252433774244115,0.276149695926898,0,0.355009592516614,0.302256294682921,0.169560592310488,1.54608682530637,1.63647672354501,0.286804595389004,0,0,0,0,0,0,9.38697193978896,1.28648187638577,16.5761905622977,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,1.26755034821831,0,4.13552934676983,0,0,0.686271241194102,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.117408694235822,1.44366447761074,1.85194205030644,0.951270761172991,0,0,7.14029317653452,1.17002132569619,4.01304138179566,0.93733833986777,0.671928512795438,0.425325291727159,0.716468181622786,1.16253575405585,2.30029607499127,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,0.531876233169741,1.04007436911366,0.257207374262142,2.83698264046557,0.266422179016099,0,0.542621605391443,0,0.977208552881205,0,0,0.301439377059586,1.74306691720059,0.299918973546171,3.64871341923571,8.53837055434615,2.10833939483032,1.67737398844108,0,15.690059554479,6.51515880004106,8.6300055471161,18.2642182504693,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.831883446123229,2.49800584316026,1.26161932027148,2.81139395982512,0.300946099727719,0,1.03473071292505,0,0.737476674166813,2.08520674723399,0.783204629850962,1.37257369524342,0,0,0,0,1.66435439510497,0.604780586659361,0,1.84154367945675,0.841980283299221,0.128139149255701,1.53512174720011,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0,1.60405176242628,0.0920809889358963,0.574072240823034,1.0925470080403,0.393373244878272,4.51199612907412,2.00239876471478,4.70609861506113,2.92278449306521,1.26661954671451,1.13733384070897,4.08224892663638,0,1.54227252690289,0.270946437543853,0,5.09752546090077,3.3243040357149,2.46262230194396,0,0,0,1.96808787419823,0.650756789328606,3.50339439602256,0,0,0,0.650060246036521,0,1.25671933779759,0.308097234229289,0.307007349452259,1.65403886981437,0,0.145016693914229,0.426133137080504,0.623224249527161,0.330569830721956,1.92190067365106,1.14851441245126,0.2023155617111,0,0.62962469366128,0.6970372701606,4.92853728281742,2.12922412126809,1.73986598415015,5.18907813490976,3.43499728180779,0,1.89827654831236,0.190630193923825,4.09436466098134,0,0,0,0,0,0,1.81964233415984,4.75530963519025,0.842516912477962,0,4.6305563029944,14.7910205459458,0.272999822815972,0,0,0,6.6343897524122,18.8533880659118,0,0,0.405820753925408,0.30982349809975,1.12678241012897,0,0,0.35667105148125,1.77380532035299,0.422215270595328,0,0.75894634753143,0,0.48111056362756,1.34060455107157,2.17781969722645,2.44773882019626,4.73555909938353,1.68471475667626,1.7737206141467,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,8.64398257704175,0,0,0,1.19372242368845,0,0,0,0.281338832821026,0,0,0,3.38721580026819,0.828851746593443,0.755798243562828,0,0,0.311039587661807,0.808815160325942,0.358042349351218,0,1.38100767891707,0,1.11136990144637,0,0.185536196323703,0,0,0.437299999980979,4.34999745260876,0.341380344856499,7.11910220819746,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0,0,0,1.76985594558733,0,0.23056390438806,0.359030577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| ||
|short_description=p4@TNS3 | |short_description=p4@TNS3 | ||
}} | }} |
Latest revision as of 20:47, 18 September 2015
Short description: | p4@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413551_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | C9JWN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.48e-18 | 36 |
blood vessel endothelial cell | 5.15e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.15e-17 | 18 |
meso-epithelial cell | 8.79e-16 | 45 |
endothelial cell of vascular tree | 3.40e-15 | 24 |
mesodermal cell | 1.27e-10 | 121 |
endothelial cell of artery | 6.00e-09 | 9 |
lining cell | 8.43e-09 | 58 |
barrier cell | 8.43e-09 | 58 |
vein endothelial cell | 3.82e-07 | 6 |
aortic endothelial cell | 7.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.15e-17 | 18 |
endothelium | 5.15e-17 | 18 |
cardiovascular system endothelium | 5.15e-17 | 18 |
simple squamous epithelium | 1.57e-14 | 22 |
vessel | 2.36e-13 | 68 |
epithelial tube open at both ends | 2.98e-12 | 59 |
blood vessel | 2.98e-12 | 59 |
blood vasculature | 2.98e-12 | 59 |
vascular cord | 2.98e-12 | 59 |
squamous epithelium | 5.69e-12 | 25 |
epithelial tube | 4.50e-11 | 117 |
vasculature | 9.79e-11 | 78 |
vascular system | 9.79e-11 | 78 |
unilaminar epithelium | 3.41e-10 | 148 |
trunk | 3.43e-10 | 199 |
splanchnic layer of lateral plate mesoderm | 1.87e-09 | 83 |
endothelial tube | 6.00e-09 | 9 |
arterial system endothelium | 6.00e-09 | 9 |
endothelium of artery | 6.00e-09 | 9 |
anatomical conduit | 9.78e-09 | 240 |
epithelium | 3.37e-08 | 306 |
cell layer | 7.00e-08 | 309 |
mesoderm | 2.11e-07 | 315 |
mesoderm-derived structure | 2.11e-07 | 315 |
presumptive mesoderm | 2.11e-07 | 315 |
excretory tube | 2.87e-07 | 16 |
kidney epithelium | 2.87e-07 | 16 |
urinary system structure | 3.44e-07 | 47 |
circulatory system | 3.90e-07 | 112 |
multilaminar epithelium | 5.27e-07 | 83 |
renal system | 6.78e-07 | 48 |