FFCP PHASE1:Hg19::chr7:47493279..47493290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64759 | |EntrezGene=64759 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |HGNC=21616 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWN9 | |UniProt=C9JWN9 | ||
|association_with_transcript=-450bp_to_ENST00000413551_5end | |association_with_transcript=-450bp_to_ENST00000413551_5end | ||
|cluster_id=chr7:47493279..47493290,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_36_at_TNS3_5end | |description=CAGE_peak_36_at_TNS3_5end | ||
|id=chr7:47493279..47493290,- | |id=chr7:47493279..47493290,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;9.90e-11;3!CL:0002577;9.90e-11;3!CL:0000349;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,8.99e-11,3;CL:0002541,9.90e-11,3;CL:0000349,6.38e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1!UBERON:0005425;2.37e-29;1!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.67e-08!14;UBERON:0000158!1.67e-08!14;UBERON:0003124!2.03e-08!7 | |ontology_enrichment_uberon=UBERON:0005631!1.67e-08!14;UBERON:0000158!1.67e-08!14;UBERON:0003124!2.03e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0001987;2.74e-29;4!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0000478;2.35e-11;24!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.57e-37,7;UBERON:0001987,2.37e-29,4;UBERON:0004340,2.37e-29,4;UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0005631,6.09e-19,14;UBERON:0000158,6.09e-19,14;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0000478,2.27e-11,24;UBERON:0000920,9.90e-11,3;UBERON:0001781,2.43e-08,4;UBERON:0004923,2.41e-07,66 | |||
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| ||
|short_description=p36@TNS3 | |short_description=p36@TNS3 | ||
}} | }} |
Latest revision as of 20:48, 18 September 2015
Short description: | p36@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_TNS3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -450bp_to_ENST00000413551_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | C9JWN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.99e-11 | 3 |
chorionic membrane mesenchymal stem cell | 9.90e-11 | 3 |
extraembryonic cell | 6.38e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 5.57e-37 | 7 |
placenta | 2.37e-29 | 4 |
allantois | 2.37e-29 | 4 |
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
extraembryonic membrane | 6.09e-19 | 14 |
membranous layer | 6.09e-19 | 14 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
extraembryonic structure | 2.27e-11 | 24 |
egg chorion | 9.90e-11 | 3 |
layer of retina | 2.43e-08 | 4 |
organ component layer | 2.41e-07 | 66 |