FFCP PHASE1:Hg19::chr5:7869247..7869312,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:7869247..7869312,+
|short_description=p1@MTRR
|description=CAGE_peak_1_at_MTRR_5end
|association_with_transcript=0bp_to_ENST00000341013,ENST00000440940,ENS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4552 | |EntrezGene=4552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7473 | |HGNC=7473 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAY3 | |UniProt=D6RAY3 | ||
|association_with_transcript=0bp_to_ENST00000341013,ENST00000440940,ENST00000503550,ENST00000508047,ENST00000510279,ENST00000511461,ENST00000514220,ENST00000514369_5end | |||
|cluster_id=chr5:7869247..7869312,+ | |||
|description=CAGE_peak_1_at_MTRR_5end | |||
|id=chr5:7869247..7869312,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.38e-07!53;CL:0000051!7.38e-07!53;CL:0000838!7.71e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.38e-07,53;CL:0000051,7.38e-07,53;CL:0000838,7.71e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.90e-08;29 | |||
|ontology_enrichment_disease=DOID:162!1.04e-18!235;DOID:14566!5.76e-18!239;DOID:305!2.74e-15!106;DOID:0050687!1.87e-14!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.04e-18,235;DOID:14566,5.76e-18,239;DOID:305,2.74e-15,106;DOID:0050687,1.87e-14,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.79e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.74e-07;9!UBERON:0001557;1.74e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.79e-07,9 | |||
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027075229 | ||
|short_description=p1@MTRR | |||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p1@MTRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTRR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341013, ENST00000440940, ENST00000503550, ENST00000508047, ENST00000510279, ENST00000511461, ENST00000514220, ENST00000514369_5end |
EntrezGene: | MTRR |
HGNC: | 7473 |
UniProt: | D6RAY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.38e-07 | 53 |
common lymphoid progenitor | 7.38e-07 | 53 |
lymphoid lineage restricted progenitor cell | 7.71e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.04e-18 | 235 |
disease of cellular proliferation | 5.76e-18 | 239 |
carcinoma | 2.74e-15 | 106 |
cell type cancer | 1.87e-14 | 143 |