FFCP PHASE2:Hg19::chr2:182543547..182543559,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4760 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:7762 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=7762 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13562 | ||
|association_with_transcript=27bp_to_BT019731_5end | |association_with_transcript=27bp_to_BT019731_5end | ||
|cluster_id=chr2:182543547..182543559,- | |cluster_id=chr2:182543547..182543559,- |
Latest revision as of 21:22, 18 September 2015
Short description: | p9@NEUROD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEUROD1_5end |
Coexpression cluster: | C939_neuroblastoma_argyrophil_small_cerebellum_retinoblastoma_pineal_medulloblastoma |
Association with transcript: | 27bp_to_BT019731_5end |
EntrezGene: | NEUROD1 |
HGNC: | 7762 |
UniProt: | Q13562 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@NEUROD1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of cervix | 1.21e-13 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.52e-37 | 6 |
rhombic lip | 1.52e-37 | 6 |
regional part of metencephalon | 2.47e-25 | 9 |
metencephalon | 2.47e-25 | 9 |
future metencephalon | 2.47e-25 | 9 |
segmental subdivision of hindbrain | 3.29e-19 | 12 |
hindbrain | 3.29e-19 | 12 |
presumptive hindbrain | 3.29e-19 | 12 |
segmental subdivision of nervous system | 8.57e-18 | 13 |
posterior neural tube | 1.59e-15 | 15 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.82e-08 | 14 |
lung small cell carcinoma | 1.31e-07 | 4 |
Showing 1 to 2 of 2 entries