FFCP PHASE1:Hg19::chr6:43110086..43110123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5754 | |EntrezGene=5754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9618 | |HGNC=9618 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461100,ENST00000493339,ENST00000494146,ENST00000497957_5end | |association_with_transcript=0bp_to_ENST00000461100,ENST00000493339,ENST00000494146,ENST00000497957_5end | ||
|cluster_id=chr6:43110086..43110123,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_9_at_PTK7_5end | |description=CAGE_peak_9_at_PTK7_5end | ||
|id=chr6:43110086..43110123,+ | |id=chr6:43110086..43110123,+ | ||
|ontology_enrichment_celltype=CL:0000084!8.81e-31!25;CL:0000827!8.81e-31!25;CL:0000625!1.84e-30!11;CL:0000791!1.09e-26!18;CL:0000789!1.09e-26!18;CL:0002420!1.09e-26!18;CL:0002419!1.09e-26!18;CL:0000790!1.09e-26!18;CL:0000784!1.08e-13!3;CL:0000838!4.25e-13!52;CL:0000542!8.62e-13!53;CL:0000051!8.62e-13!53;CL:0000738!1.88e-07!140 | |ontology_enrichment_celltype=CL:0000084!8.81e-31!25;CL:0000827!8.81e-31!25;CL:0000625!1.84e-30!11;CL:0000791!1.09e-26!18;CL:0000789!1.09e-26!18;CL:0002420!1.09e-26!18;CL:0002419!1.09e-26!18;CL:0000790!1.09e-26!18;CL:0000784!1.08e-13!3;CL:0000838!4.25e-13!52;CL:0000542!8.62e-13!53;CL:0000051!8.62e-13!53;CL:0000738!1.88e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.98e-49;11!CL:0000084;3.22e-40;25!CL:0000791;1.09e-29;18!CL:0000789;1.09e-29;18!CL:0002419;1.09e-29;18!CL:0000784;3.06e-26;3!CL:0000542;1.94e-11;53!CL:0000451;1.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.40e-49,11;CL:0000084,2.57e-40,25;CL:0000827,2.57e-40,25;CL:0000791,8.07e-30,18;CL:0000789,8.07e-30,18;CL:0002420,8.07e-30,18;CL:0002419,8.07e-30,18;CL:0000790,8.07e-30,18;CL:0000784,2.46e-26,3;CL:0000838,1.68e-18,52;CL:0000542,4.04e-18,53;CL:0000051,4.04e-18,53;CL:0000738,9.92e-12,136;CL:0000037,5.14e-09,168;CL:0002087,8.25e-09,115;CL:0000988,1.99e-08,177;CL:0002031,2.31e-08,120;CL:0000451,1.37e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-29;18!CL:0000051;1.94e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.25e-15!7;UBERON:0002370!1.26e-10!4;UBERON:0005058!1.26e-10!4;UBERON:0009113!1.26e-10!4;UBERON:0003295!1.26e-10!4;UBERON:0005562!1.26e-10!4;UBERON:0003351!3.29e-07!6;UBERON:0000974!3.49e-07!10;UBERON:0001042!3.97e-07!10;UBERON:0009145!3.97e-07!10;UBERON:0000178!9.78e-07!15;UBERON:0000179!9.78e-07!15;UBERON:0000463!9.78e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.43e-19;2!UBERON:0005058;3.43e-19;2!UBERON:0009113;3.43e-19;2!UBERON:0004177;3.24e-08;5!UBERON:0005057;3.24e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.65e-10,4;UBERON:0005058,4.65e-10,4;UBERON:0009113,4.65e-10,4;UBERON:0003295,4.65e-10,4;UBERON:0005562,4.65e-10,4;UBERON:0000974,1.52e-08,10;UBERON:0003351,5.58e-07,6 | |||
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| ||
|short_description=p9@PTK7 | |short_description=p9@PTK7 | ||
}} | }} |
Latest revision as of 21:31, 18 September 2015
Short description: | p9@PTK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTK7_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000461100, ENST00000493339, ENST00000494146, ENST00000497957_5end |
EntrezGene: | PTK7 |
HGNC: | 9618 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.40e-49 | 11 |
T cell | 2.57e-40 | 25 |
pro-T cell | 2.57e-40 | 25 |
mature alpha-beta T cell | 8.07e-30 | 18 |
alpha-beta T cell | 8.07e-30 | 18 |
immature T cell | 8.07e-30 | 18 |
mature T cell | 8.07e-30 | 18 |
immature alpha-beta T cell | 8.07e-30 | 18 |
plasmacytoid dendritic cell | 2.46e-26 | 3 |
lymphoid lineage restricted progenitor cell | 1.68e-18 | 52 |
lymphocyte | 4.04e-18 | 53 |
common lymphoid progenitor | 4.04e-18 | 53 |
leukocyte | 9.92e-12 | 136 |
hematopoietic stem cell | 5.14e-09 | 168 |
nongranular leukocyte | 8.25e-09 | 115 |
hematopoietic cell | 1.99e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 2.31e-08 | 120 |
dendritic cell | 1.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.65e-10 | 4 |
hemolymphoid system gland | 4.65e-10 | 4 |
thymic region | 4.65e-10 | 4 |
pharyngeal gland | 4.65e-10 | 4 |
thymus primordium | 4.65e-10 | 4 |
neck | 1.52e-08 | 10 |
pharyngeal epithelium | 5.58e-07 | 6 |