FFCP PHASE1:Hg19::chrX:105066499..105066514,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:105066499..105066514,+
|short_description=p2@NRK
|description=CAGE_peak_2_at_NRK_5end
|association_with_transcript=-21bp_to_ENST00000243300,ENST00000428173...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203447 | |EntrezGene=203447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25391 | |HGNC=25391 | ||
|TSSclassifier=strong | |||
|UniProt=F5H049,Q7Z2Y5 | |UniProt=F5H049,Q7Z2Y5 | ||
|association_with_transcript=-21bp_to_ENST00000243300,ENST00000428173,NM_198465,uc004emd.2,uc010npc.1_5end | |||
|cluster_id=chrX:105066499..105066514,+ | |||
|coexpression_cluster_id=C1194 | |||
|description=CAGE_peak_2_at_NRK_5end | |||
|id=chrX:105066499..105066514,+ | |||
|ontology_enrichment_celltype=CL:1000449!2.54e-10!16;CL:1000507!3.98e-09!12;CL:1000494!3.98e-09!12;CL:1000497!1.47e-08!18;CL:0002518!1.47e-08!18;CL:0002681!6.11e-08!13;CL:0002584!6.11e-08!13;CL:0000188!9.67e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.02e-14;15!CL:1000507;5.48e-14;10!CL:1000494;5.48e-14;10!CL:1000497;1.60e-12;17!CL:0002518;1.60e-12;17!CL:0002681;4.91e-11;12!CL:0002584;4.91e-11;12!CL:0000188;4.63e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,8.82e-15,15;CL:1000507,4.27e-14,10;CL:1000494,4.27e-14,10;CL:1000497,1.41e-12,17;CL:0002518,1.41e-12,17;CL:0002681,5.01e-11,12;CL:0002584,5.01e-11,12;CL:0000188,4.36e-10,9;CL:0000393,1.71e-09,61;CL:0000211,1.71e-09,61;CL:0000187,1.41e-08,55;CL:0000680,8.46e-08,58;CL:0000056,8.46e-08,58;CL:0000355,8.46e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002553!8.60e-14!70;UBERON:0003103!1.10e-13!69;UBERON:0000481!5.42e-13!347;UBERON:0003886!8.77e-13!63;UBERON:0000464!2.49e-12!104;UBERON:0000080!2.53e-11!18;UBERON:0002120!2.53e-11!18;UBERON:0004875!2.53e-11!18;UBERON:0005721!2.53e-11!18;UBERON:0005754!2.53e-11!18;UBERON:0007297!2.53e-11!18;UBERON:0006555!4.07e-11!17;UBERON:0005103!4.07e-11!17;UBERON:0000083!4.07e-11!17;UBERON:0009201!4.07e-11!17;UBERON:0004819!4.07e-11!17;UBERON:0006553!4.07e-11!17;UBERON:0003074!4.07e-11!17;UBERON:0003060!4.07e-11!17;UBERON:0004876!6.63e-11!20;UBERON:0000119!1.70e-10!312;UBERON:0004211!2.54e-10!16;UBERON:0001285!2.54e-10!16;UBERON:0007684!2.54e-10!16;UBERON:0003220!2.54e-10!16;UBERON:0004208!2.54e-10!16;UBERON:0000483!6.99e-10!309;UBERON:0000468!9.19e-10!659;UBERON:0000058!1.13e-09!26;UBERON:0003887!1.19e-09!21;UBERON:0005256!1.27e-09!143;UBERON:0009773!3.98e-09!12;UBERON:0001231!3.98e-09!12;UBERON:0004810!3.98e-09!12;UBERON:0007625!5.68e-09!11;UBERON:0000466!7.87e-09!126;UBERON:0000489!1.28e-08!32;UBERON:0000064!1.44e-08!219;UBERON:0002100!1.70e-08!216;UBERON:0000922!3.26e-08!612;UBERON:0000991!5.68e-08!21;UBERON:0009196!5.68e-08!21;UBERON:0009117!5.68e-08!21;UBERON:0005564!5.68e-08!21;UBERON:0001225!6.11e-08!13;UBERON:0008987!6.11e-08!13;UBERON:0003064!7.72e-08!37;UBERON:0000475!8.27e-08!365;UBERON:0002113!1.05e-07!27;UBERON:0003918!1.05e-07!27;UBERON:0005095!1.05e-07!27;UBERON:0007687!1.05e-07!27;UBERON:0003104!1.57e-07!238;UBERON:0009142!1.57e-07!238;UBERON:0004176!2.35e-07!22;UBERON:0001851!3.89e-07!16;UBERON:0000914!8.04e-07!83;UBERON:0002329!8.04e-07!83;UBERON:0003077!8.04e-07!83;UBERON:0003059!8.04e-07!83;UBERON:0007282!8.04e-07!83;UBERON:0009618!8.04e-07!83;UBERON:0007285!8.04e-07!83;UBERON:0000353!8.15e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.02e-14;15!UBERON:0004819;1.02e-14;15!UBERON:0001285;1.02e-14;15!UBERON:0007684;1.02e-14;15!UBERON:0004211;5.48e-14;10!UBERON:0009773;5.48e-14;10!UBERON:0001231;5.48e-14;10!UBERON:0004810;5.48e-14;10!UBERON:0007625;3.42e-13;11!UBERON:0001225;4.91e-11;12!UBERON:0008987;4.91e-11;12!UBERON:0002113;8.63e-11;24!UBERON:0011143;8.63e-11;24!UBERON:0000489;1.26e-10;29!UBERON:0001851;2.52e-10;15!UBERON:0006554;8.23e-09;30!UBERON:0001008;8.23e-09;30!UBERON:0000353;2.66e-08;15!UBERON:0001134;4.42e-08;16!UBERON:0002036;4.42e-08;16!UBERON:0005631;1.25e-07;10!UBERON:0000158;1.25e-07;10!UBERON:0003135;7.09e-07;11!UBERON:0001456;9.02e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,4.90e-16,16;UBERON:0004819,4.90e-16,16;UBERON:0004211,8.82e-15,15;UBERON:0009773,8.82e-15,15;UBERON:0001231,8.82e-15,15;UBERON:0001285,8.82e-15,15;UBERON:0007684,8.82e-15,15;UBERON:0004208,8.82e-15,15;UBERON:0003103,1.62e-14,68;UBERON:0004810,4.27e-14,10;UBERON:0003104,5.00e-14,160;UBERON:0009142,5.00e-14,160;UBERON:0007625,3.15e-13,11;UBERON:0002113,3.07e-11,26;UBERON:0003918,3.07e-11,26;UBERON:0011143,3.07e-11,26;UBERON:0005095,3.07e-11,26;UBERON:0007687,3.07e-11,26;UBERON:0000489,4.64e-11,31;UBERON:0001225,5.01e-11,12;UBERON:0008987,5.01e-11,12;UBERON:0001851,2.58e-10,15;UBERON:0007503,4.85e-10,78;UBERON:0001134,8.64e-09,62;UBERON:0002036,8.64e-09,62;UBERON:0003082,8.64e-09,62;UBERON:0005423,1.00e-08,581;UBERON:0000922,1.67e-08,592;UBERON:0000353,2.70e-08,15;UBERON:0002385,2.71e-08,64;UBERON:0001015,2.71e-08,64;UBERON:0000383,2.71e-08,64;UBERON:0002100,3.75e-08,199;UBERON:0005631,3.93e-08,14;UBERON:0000158,3.93e-08,14;UBERON:0000483,6.41e-08,306;UBERON:0000119,1.15e-07,309;UBERON:0002329,1.96e-07,71;UBERON:0003059,1.96e-07,71;UBERON:0007282,1.96e-07,71;UBERON:0004290,1.96e-07,71;UBERON:0009618,1.96e-07,71;UBERON:0006554,2.24e-07,47;UBERON:0003077,3.10e-07,72;UBERON:0007285,3.10e-07,72;UBERON:0001008,4.12e-07,48;UBERON:0003135,4.70e-07,11;UBERON:0007524,4.85e-07,73;UBERON:0005256,6.87e-07,122 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,4.00293193412522,0,0,0,0,0,4.42321085702716,4.18680700783456,2.40285509343189,1.58260186937072,2.97039247104112,2.31978163009541,0,0,0,0,0.492484232307152,1.02000345622126,0.626909442956176,1.14494394852423,0.821246550437305,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,2.42938867502708,0,0,0.144846518960824,0,0,3.78139268656271,4.43458794925128,3.42555664203192,1.70272798147026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,1.12264686313085,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,1.06748995729705,0,6.22422070799533,0.67355336034844,2.28846664358842,0.151357427644931,0,0.234321431833797,0,0,0,1.52664848236894,0.647491777472526,0.280901613404497,0,4.79053837515895,0,0,0,0,0,2.18836948140286,4.12891115577482,0.831192346452549,0,0,0,1.70148274740032,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.573609190778008,0.487894824518382,0.530119073285941,0.929551542956147,0.932949495138334,0.756962552626885,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,2.91665277507493,0.768251997860379,0,0,0.0925884451585296,0,0,1.44331342025273,1.15930404975077,2.34817388471643,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.66004457238855,0.517086863031111,0,0.845302752556,0,0,2.57207374262142,0,3.19706614819319,1.85871391755592,0,1.64648067356154,0.325736184293735,0,0.791951872933429,1.20575750823834,0.871533458600294,2.69927076191554,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,1.08506009479894,0.207970861530807,1.78428988797162,4.1002627908823,0,0.601892199455438,0,0,3.32112799267718,2.02806085395873,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,1.5119514666484,0.248107807818777,1.07423381301644,0,0.640695746278505,5.62877973973374,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,3.60959690325929,8.70273309279887,12.5495963068297,2.92278449306521,10.0274047448232,0,0,6.69339339916632,3.08454505380579,4.87703587578935,4.01351819083883,7.64628819135115,2.49322802678617,6.04461837749881,0,0,4.10320200186223,4.59220503979588,2.60302715731442,6.4915837338065,0,0,0,0.650060246036521,1.6068392984416,1.54673149267395,5.08360436478326,6.44715433849744,6.753992051742,7.62683738564743,7.39585138962565,8.01130297711348,3.82837753280971,0,0,0,0,0,0,0.6970372701606,0,0,0,0.18532421910392,0,4.09374206295634,6.01120906965579,2.09693213316207,2.04718233049067,5.99114583247489,0,0,6.47540847299933,3.84351841630477,6.9509317383955,0,0,0,5.85160486907508,0,0,0,0.424216295861138,0,0,0,0.438450885253763,2.31510213706675,5.9030527684197,0,0.30982349809975,0,4.58916327052965,1.47373561519682,0,0,0,0,0.75894634753143,0,0,0,0,4.80133383961574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,1.90995587790152,8.31501106331388,3.68592842519078,0,0,0,0,0,2.19172787076177,1.38141957765574,0,0,0,1.55519793830904,0,0,0,1.1837208676432,0,0,0,0,0,0.7812832832557,17.4045399992429,0.724999575434793,0,1.27126825146383,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0,0,0,2.15460723810632,0.113942055847001,0.922255617552241,0,0,2.87101043758728,4.67147726349498,5.33034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,4.27721101453538,0,0,0,0.337005664903385,35.3134164811467,0.234264445725339,0,0,0,1.57833761139756,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,5.76598005198699,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,2.51354161145029,3.89572720819862,0,2.39614800598789,1.28767814440971,0.89268582976749,4.63565960158411,0.720599767084807,0,0,0,0,0,0,0,0,1.28602518772015,2.47570985875021,3.32352270423348,0,0,0,0,4.57073102335349,5.4028225779048,107.712343249795,0,0,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,22.7487363968726,0,0,0.113312091520126,0,0,0.775697738169303,0.13223260174269,0,0,0.106787412567695,2.35806457649499,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.471162288750703,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0.228840068396924,0,0,0,1.59296767163702,0.899606224327209,0.931577741257556,0,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,1.22061219961398,0.909243296012797,1.07410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,11.7942875256209,0,0,1.389134845943,2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| ||
|short_description=p2@NRK | |||
}} | }} |
Latest revision as of 21:40, 18 September 2015
Short description: | p2@NRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRK_5end |
Coexpression cluster: | C1194_skeletal_large_diaphragm_throat_trachea_testicular_tongue |
Association with transcript: | -21bp_to_ENST00000243300, ENST00000428173, NM_198465, uc004emd.2, uc010npc.1_5end |
EntrezGene: | NRK |
HGNC: | 25391 |
UniProt: | F5H049Q7Z2Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 8.82e-15 | 15 |
kidney tubule cell | 4.27e-14 | 10 |
nephron tubule epithelial cell | 4.27e-14 | 10 |
kidney cell | 1.41e-12 | 17 |
kidney epithelial cell | 1.41e-12 | 17 |
kidney cortical cell | 5.01e-11 | 12 |
renal cortical epithelial cell | 5.01e-11 | 12 |
cell of skeletal muscle | 4.36e-10 | 9 |
electrically responsive cell | 1.71e-09 | 61 |
electrically active cell | 1.71e-09 | 61 |
muscle cell | 1.41e-08 | 55 |
muscle precursor cell | 8.46e-08 | 58 |
myoblast | 8.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.46e-08 | 58 |