FFCP PHASE1:Hg19::chr17:17480494..17480502,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10400 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8830 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBM1 | |||
|association_with_transcript=-168bp_to_CR457099_5end | |||
|cluster_id=chr17:17480494..17480502,- | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_15_at_PEMT_5end | |||
|id=chr17:17480494..17480502,- | |||
|ontology_enrichment_celltype=CL:0000136!1.77e-21!15;CL:1000507!2.49e-15!12;CL:1000494!2.49e-15!12;CL:0002521!2.34e-13!3;CL:0000239!1.45e-12!3;CL:1000615!1.45e-12!3;CL:0002306!1.45e-12!3;CL:1000449!2.96e-11!16;CL:0002681!1.61e-10!13;CL:0002584!1.61e-10!13;CL:1000497!6.76e-10!18;CL:0002518!6.76e-10!18;CL:0000325!3.32e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.61e-42;13!CL:0002521;1.86e-21;3!CL:0002617;3.57e-09;2!CL:0000650;6.93e-09;2!CL:1000500;6.93e-09;2!CL:1000618;6.93e-09;2!CL:1001318;6.93e-09;2!CL:0002173;6.93e-09;2!CL:0000349;7.81e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.14e-36,15;CL:0002521,1.29e-21,3;CL:0002617,3.71e-09,2;CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2;CL:0000349,8.38e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.52e-09;2!UBERON:0009117;5.59e-07;10!UBERON:0005564;5.59e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!2.49e-15!12;UBERON:0001231!2.49e-15!12;UBERON:0004810!2.49e-15!12;UBERON:0004876!1.12e-14!20;UBERON:0006555!7.06e-14!17;UBERON:0005103!7.06e-14!17;UBERON:0000083!7.06e-14!17;UBERON:0009201!7.06e-14!17;UBERON:0004819!7.06e-14!17;UBERON:0006553!7.06e-14!17;UBERON:0003074!7.06e-14!17;UBERON:0003060!7.06e-14!17;UBERON:0002190!2.34e-13!3;UBERON:0000080!4.94e-13!18;UBERON:0002120!4.94e-13!18;UBERON:0004875!4.94e-13!18;UBERON:0005721!4.94e-13!18;UBERON:0005754!4.94e-13!18;UBERON:0007297!4.94e-13!18;UBERON:0002113!1.11e-12!27;UBERON:0003918!1.11e-12!27;UBERON:0005095!1.11e-12!27;UBERON:0007687!1.11e-12!27;UBERON:0006853!1.45e-12!3;UBERON:0007685!1.45e-12!3;UBERON:0004134!1.45e-12!3;UBERON:0004211!2.96e-11!16;UBERON:0001285!2.96e-11!16;UBERON:0007684!2.96e-11!16;UBERON:0003220!2.96e-11!16;UBERON:0004208!2.96e-11!16;UBERON:0003887!5.55e-11!21;UBERON:0001225!1.61e-10!13;UBERON:0008987!1.61e-10!13;UBERON:0000489!2.12e-10!32;UBERON:0003064!7.01e-09!37;UBERON:0000058!1.28e-08!26;UBERON:0006554!1.37e-08!44;UBERON:0001851!2.00e-08!16;UBERON:0001008!2.37e-08!45;UBERON:0002072!3.54e-08!5;UBERON:0003886!5.58e-08!63;UBERON:0000353!6.82e-08!17;UBERON:0002553!6.46e-07!70;UBERON:0002417!7.44e-07!61;UBERON:0000916!7.44e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.86e-21;3!UBERON:0001301;8.19e-17;1!UBERON:0002072;2.77e-13;5!UBERON:0003135;4.38e-13;11!UBERON:0003567;6.93e-09;2!UBERON:0003838;6.93e-09;2!UBERON:0003586;6.93e-09;2!UBERON:0005169;6.93e-09;2!UBERON:0002321;6.93e-09;2!UBERON:0005215;6.93e-09;2!UBERON:0002303;6.93e-09;2!UBERON:0002319;6.93e-09;2!UBERON:0000473;1.65e-08;8!UBERON:0005631;5.59e-07;10!UBERON:0000158;5.59e-07;10!UBERON:0003101;8.02e-07;22!UBERON:0000079;8.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.29e-21,3;UBERON:0001301,8.86e-17,1;UBERON:0002072,2.23e-13,5;UBERON:0003135,4.11e-13,11;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0000473,1.53e-08,8;UBERON:0005103,1.53e-08,8;UBERON:0000083,1.53e-08,8;UBERON:0009201,1.53e-08,8;UBERON:0006553,1.53e-08,8;UBERON:0003074,1.53e-08,8;UBERON:0003060,1.53e-08,8;UBERON:0000080,1.09e-07,9;UBERON:0002120,1.09e-07,9;UBERON:0004875,1.09e-07,9;UBERON:0005721,1.09e-07,9;UBERON:0005754,1.09e-07,9;UBERON:0007297,1.09e-07,9;UBERON:0003101,7.78e-07,22;UBERON:0000079,7.78e-07,22 | |||
|phase1_expression=0,10.0627246228762,0.563817616383885,0,0.893922188854576,0,10.1319951267324,1.89515962028049,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,7.5967024754802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.812839312631559,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.638002319463839,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71762004253481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72008901684737,1.7548292581589,4.90152922821539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21245917149183,1.87574891109325,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p15@PEMT | |||
}} |
Latest revision as of 21:41, 18 September 2015
Short description: | p15@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PEMT_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | -168bp_to_CR457099_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | Q9UBM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.14e-36 | 15 |
subcutaneous fat cell | 1.29e-21 | 3 |
adipocyte of breast | 3.71e-09 | 2 |
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
extraembryonic cell | 8.38e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.29e-21 | 3 |
epididymis | 8.86e-17 | 1 |
hypodermis | 2.23e-13 | 5 |
male reproductive organ | 4.11e-13 | 11 |
abdomen connective tissue | 8.74e-09 | 2 |
abdominal segment connective tissue | 8.74e-09 | 2 |
trunk connective tissue | 8.74e-09 | 2 |
interstitial tissue | 8.74e-09 | 2 |
extraglomerular mesangium | 8.74e-09 | 2 |
kidney interstitium | 8.74e-09 | 2 |
juxtaglomerular apparatus | 8.74e-09 | 2 |
mesangium | 8.74e-09 | 2 |
testis | 1.53e-08 | 8 |
mesonephric epithelium | 1.53e-08 | 8 |
mesonephric tubule | 1.53e-08 | 8 |
nephric duct | 1.53e-08 | 8 |
renal duct | 1.53e-08 | 8 |
mesonephric duct | 1.53e-08 | 8 |
pronephric duct | 1.53e-08 | 8 |
mesonephros | 1.09e-07 | 9 |
pronephros | 1.09e-07 | 9 |
nephrogenic cord | 1.09e-07 | 9 |
pronephric mesoderm | 1.09e-07 | 9 |
rostral part of nephrogenic cord | 1.09e-07 | 9 |
presumptive pronephric mesoderm | 1.09e-07 | 9 |
male organism | 7.78e-07 | 22 |
male reproductive system | 7.78e-07 | 22 |