FFCP PHASE1:Hg19::chr6:43266063..43266090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10864 | |EntrezGene=10864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10971 | |HGNC=10971 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000372574_5end | |association_with_transcript=-6bp_to_ENST00000372574_5end | ||
|cluster_id=chr6:43266063..43266090,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SLC22A7_5end | |description=CAGE_peak_3_at_SLC22A7_5end | ||
|id=chr6:43266063..43266090,+ | |id=chr6:43266063..43266090,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.15e-31!12;CL:0000417!2.15e-31!12;CL:0000668!2.15e-31!12;CL:0000414!2.15e-31!12;CL:0000412!2.15e-31!12;CL:0000182!2.15e-31!12;CL:0002322!3.59e-09!5 | |ontology_enrichment_celltype=CL:0000181!2.15e-31!12;CL:0000417!2.15e-31!12;CL:0000668!2.15e-31!12;CL:0000414!2.15e-31!12;CL:0000412!2.15e-31!12;CL:0000182!2.15e-31!12;CL:0002322!3.59e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.12e-42;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.97e-42,12;CL:0000223,1.50e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.97e-32;11!UBERON:0009497;5.26e-27;13!UBERON:0003104;7.77e-22;31!UBERON:0001041;9.61e-12;30 | |||
|ontology_enrichment_disease=DOID:178!1.63e-11!1;DOID:326!1.63e-11!1;DOID:3978!1.63e-11!1;DOID:3394!1.63e-11!1;DOID:5844!1.63e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.35e-35!19;UBERON:0006925!8.35e-35!19;UBERON:0008836!8.35e-35!19;UBERON:0008835!5.94e-30!22;UBERON:0003894!5.94e-30!22;UBERON:0009854!1.29e-28!23;UBERON:0007499!2.92e-26!25;UBERON:0009497!2.92e-26!25;UBERON:0000015!2.92e-26!25;UBERON:0002423!2.92e-26!25;UBERON:0006235!2.92e-26!25;UBERON:0004161!2.92e-26!25;UBERON:0005057!3.21e-25!26;UBERON:0009856!3.21e-25!26;UBERON:0005172!1.35e-21!55;UBERON:0005173!1.35e-21!55;UBERON:0002365!5.12e-21!31;UBERON:0002330!5.12e-21!31;UBERON:0002417!2.53e-19!61;UBERON:0000916!2.53e-19!61;UBERON:0002368!1.62e-18!35;UBERON:0000949!3.33e-14!45;UBERON:0003929!1.10e-11!54;UBERON:0001301!1.81e-11!1;UBERON:0002530!1.30e-10!59;UBERON:0005177!2.44e-10!107;UBERON:0009569!1.05e-09!113;UBERON:0005911!2.28e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.80e-47;19!UBERON:0006925;5.80e-47;19!UBERON:0002423;1.40e-35;25!UBERON:0002365;1.62e-27;31!UBERON:0002330;1.62e-27;31!UBERON:0002368;2.72e-24;33!UBERON:0000949;9.25e-18;43!UBERON:0005172;9.35e-17;52!UBERON:0005173;9.35e-17;52!UBERON:0002417;4.66e-13;58!UBERON:0000916;4.66e-13;58!UBERON:0002530;2.89e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.62e-47,19;UBERON:0006925,5.62e-47,19;UBERON:0008836,5.62e-47,19;UBERON:0008835,1.65e-40,22;UBERON:0003894,1.65e-40,22;UBERON:0009854,9.99e-39,23;UBERON:0007499,1.37e-35,25;UBERON:0009497,1.37e-35,25;UBERON:0000015,1.37e-35,25;UBERON:0002423,1.37e-35,25;UBERON:0006235,1.37e-35,25;UBERON:0004161,1.37e-35,25;UBERON:0009856,3.35e-34,26;UBERON:0002365,1.33e-28,31;UBERON:0002330,1.33e-28,31;UBERON:0002368,2.86e-25,35;UBERON:0005172,3.56e-25,54;UBERON:0005173,3.56e-25,54;UBERON:0002417,1.44e-22,60;UBERON:0000916,1.44e-22,60;UBERON:0000949,1.60e-19,45;UBERON:0003929,3.66e-16,54;UBERON:0002530,9.76e-15,59;UBERON:0005177,5.24e-13,101;UBERON:0009569,1.26e-11,112;UBERON:0005911,2.09e-10,82;UBERON:0001041,9.14e-10,87;UBERON:0003104,8.31e-08,160;UBERON:0009142,8.31e-08,160;UBERON:0003914,4.60e-07,117;UBERON:0004921,6.23e-07,118;UBERON:0005256,9.65e-07,122 | |||
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|short_description=p3@SLC22A7 | |short_description=p3@SLC22A7 | ||
}} | }} |
Latest revision as of 21:55, 18 September 2015
Short description: | p3@SLC22A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A7_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -6bp_to_ENST00000372574_5end |
EntrezGene: | SLC22A7 |
HGNC: | 10971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.97e-42 | 12 |
endodermal cell | 1.50e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.62e-47 | 19 |
digestive gland | 5.62e-47 | 19 |
liver bud | 5.62e-47 | 19 |
hepatic diverticulum | 1.65e-40 | 22 |
liver primordium | 1.65e-40 | 22 |
digestive tract diverticulum | 9.99e-39 | 23 |
epithelial sac | 1.37e-35 | 25 |
epithelium of foregut-midgut junction | 1.37e-35 | 25 |
anatomical boundary | 1.37e-35 | 25 |
hepatobiliary system | 1.37e-35 | 25 |
foregut-midgut junction | 1.37e-35 | 25 |
septum transversum | 1.37e-35 | 25 |
sac | 3.35e-34 | 26 |
exocrine gland | 1.33e-28 | 31 |
exocrine system | 1.33e-28 | 31 |
endocrine gland | 2.86e-25 | 35 |
abdomen element | 3.56e-25 | 54 |
abdominal segment element | 3.56e-25 | 54 |
abdominal segment of trunk | 1.44e-22 | 60 |
abdomen | 1.44e-22 | 60 |
endocrine system | 1.60e-19 | 45 |
gut epithelium | 3.66e-16 | 54 |
gland | 9.76e-15 | 59 |
trunk region element | 5.24e-13 | 101 |
subdivision of trunk | 1.26e-11 | 112 |
endo-epithelium | 2.09e-10 | 82 |
foregut | 9.14e-10 | 87 |
mesenchyme | 8.31e-08 | 160 |
entire embryonic mesenchyme | 8.31e-08 | 160 |
epithelial tube | 4.60e-07 | 117 |
subdivision of digestive tract | 6.23e-07 | 118 |
trunk mesenchyme | 9.65e-07 | 122 |