FFCP PHASE1:Hg19::chr11:62623024..62623031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32688 | |HGNC=32688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-64bp_to_ENST00000535689,ENST00000537965,ENST00000540865,ENST00000540904,ENST00000541578,ENST00000541615,ENST00000544550,ENST00000545308,ENST00000545440_5end | |association_with_transcript=-64bp_to_ENST00000535689,ENST00000537965,ENST00000540865,ENST00000540904,ENST00000541578,ENST00000541615,ENST00000544550,ENST00000545308,ENST00000545440_5end | ||
|cluster_id=chr11:62623024..62623031,- | |||
|coexpression_cluster_id=C237 | |coexpression_cluster_id=C237 | ||
|description=CAGE_peak_10_at_SNHG1_5end | |description=CAGE_peak_10_at_SNHG1_5end | ||
|id=chr11:62623024..62623031,- | |id=chr11:62623024..62623031,- | ||
|ontology_enrichment_celltype=CL:0000542!1.35e-08!53;CL:0000051!1.35e-08!53;CL:0000838!1.58e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.35e-08!53;CL:0000051!1.35e-08!53;CL:0000838!1.58e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:162!2.53e-22!235;DOID:14566!1.46e-21!239;DOID:2531!7.81e-20!51;DOID:0060083!7.81e-20!51;DOID:1240!2.04e-12!39;DOID:0050686!2.92e-12!137;DOID:0050687!4.47e-09!143;DOID:0060058!1.63e-08!10;DOID:305!5.78e-07!106 | |ontology_enrichment_disease=DOID:162!2.53e-22!235;DOID:14566!1.46e-21!239;DOID:2531!7.81e-20!51;DOID:0060083!7.81e-20!51;DOID:1240!2.04e-12!39;DOID:0050686!2.92e-12!137;DOID:0050687!4.47e-09!143;DOID:0060058!1.63e-08!10;DOID:305!5.78e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:12603;2.37e-29;1!DOID:1036;3.53e-15;8!DOID:1240;8.47e-10;39!DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.16e-29,1;DOID:1036,3.06e-15,8;DOID:1240,3.62e-12,39;DOID:2531,2.03e-09,51;DOID:0060083,2.03e-09,51;DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.11481905075431,0.28853842595289,0,0.478278818186467,0,0,0,0,0,0.228234679033192,0,5.01268954180134,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,1.07842021376792,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,2.04386596391473,0,0,0,0,0,0.569261198172555,1.58936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,1.30588809870604,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0,0,0,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0.795664888465099,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0.945550727071746,1.22354542081276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33883824611688,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SNHG1 | |short_description=p10@SNHG1 | ||
}} | }} |
Latest revision as of 21:55, 18 September 2015
Short description: | p10@SNHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SNHG1_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -64bp_to_ENST00000535689, ENST00000537965, ENST00000540865, ENST00000540904, ENST00000541578, ENST00000541615, ENST00000544550, ENST00000545308, ENST00000545440_5end |
EntrezGene: | NA |
HGNC: | 32688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.16e-29 | 1 |
chronic leukemia | 3.06e-15 | 8 |
leukemia | 3.62e-12 | 39 |
hematologic cancer | 2.03e-09 | 51 |
immune system cancer | 2.03e-09 | 51 |
cervical cancer | 5.70e-07 | 5 |