FFCP PHASE1:Hg19::chr3:52001448..52001478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57060 | |EntrezGene=57060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8652 | |HGNC=8652 | ||
|TSSclassifier=strong | |||
|UniProt=E7EST1,P57723,B3KM64,C9K0A2,F8WC71,C9IZV9 | |UniProt=E7EST1,P57723,B3KM64,C9K0A2,F8WC71,C9IZV9 | ||
|association_with_transcript=0bp_to_ENST00000294192,ENST00000355852,ENST00000395013,ENST00000428823,ENST00000461544,ENST00000461554,ENST00000471308,ENST00000471358,ENST00000483411,NM_020418,uc003dch.1,uc003dci.1,uc003dcj.1,uc003dck.1_5end | |association_with_transcript=0bp_to_ENST00000294192,ENST00000355852,ENST00000395013,ENST00000428823,ENST00000461544,ENST00000461554,ENST00000471308,ENST00000471358,ENST00000483411,NM_020418,uc003dch.1,uc003dci.1,uc003dcj.1,uc003dck.1_5end | ||
|cluster_id=chr3:52001448..52001478,- | |||
|coexpression_cluster_id=C535 | |||
|description=CAGE_peak_2_at_PCBP4_5end | |description=CAGE_peak_2_at_PCBP4_5end | ||
|id=chr3:52001448..52001478,- | |id=chr3:52001448..52001478,- | ||
|ontology_enrichment_celltype=CL:0000055!2.74e-27!180;CL:0000220!2.77e-19!246;CL:0002321!7.45e-19!248;CL:0000183!4.40e-13!59;CL:0000222!9.33e-12!119;CL:0000680!1.00e-11!57;CL:0000056!1.00e-11!57;CL:0000355!1.00e-11!57;CL:0000187!2.69e-11!54;CL:0000057!4.39e-11!75;CL:0000393!6.56e-11!60;CL:0000211!6.56e-11!60;CL:0000192!3.88e-10!42;CL:0000514!3.88e-10!42;CL:0000221!2.95e-09!71;CL:0000359!2.30e-08!32;CL:0000133!1.89e-07!59;CL:0000333!6.68e-07!41 | |ontology_enrichment_celltype=CL:0000055!2.74e-27!180;CL:0000220!2.77e-19!246;CL:0002321!7.45e-19!248;CL:0000183!4.40e-13!59;CL:0000222!9.33e-12!119;CL:0000680!1.00e-11!57;CL:0000056!1.00e-11!57;CL:0000355!1.00e-11!57;CL:0000187!2.69e-11!54;CL:0000057!4.39e-11!75;CL:0000393!6.56e-11!60;CL:0000211!6.56e-11!60;CL:0000192!3.88e-10!42;CL:0000514!3.88e-10!42;CL:0000221!2.95e-09!71;CL:0000359!2.30e-08!32;CL:0000133!1.89e-07!59;CL:0000333!6.68e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.00e-08;43!CL:0000359;6.08e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.64e-19,250;CL:0000222,3.48e-12,121;CL:0000680,5.57e-12,58;CL:0000056,5.57e-12,58;CL:0000355,5.57e-12,58;CL:0000187,1.51e-11,55;CL:0000057,3.57e-11,76;CL:0000393,3.70e-11,61;CL:0000211,3.70e-11,61;CL:0000192,2.23e-10,43;CL:0000514,2.23e-10,43;CL:0000221,2.09e-09,72;CL:0000359,2.09e-08,32;CL:0000133,1.74e-07,59;CL:0000333,6.20e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000514;5.00e-08;43!CL:0000355;9.39e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!2.25e-35!309;UBERON:0000119!9.70e-35!312;UBERON:0000475!1.26e-34!365;UBERON:0000025!1.30e-21!194;UBERON:0004121!1.44e-20!169;UBERON:0000481!2.36e-20!347;UBERON:0004111!3.99e-20!241;UBERON:0000924!4.31e-19!173;UBERON:0006601!4.31e-19!173;UBERON:0000468!1.33e-18!659;UBERON:0000467!7.70e-18!625;UBERON:0000480!1.30e-17!626;UBERON:0000477!1.38e-16!286;UBERON:0005256!2.31e-16!143;UBERON:0000914!1.11e-15!83;UBERON:0002329!1.11e-15!83;UBERON:0003077!1.11e-15!83;UBERON:0003059!1.11e-15!83;UBERON:0007282!1.11e-15!83;UBERON:0009618!1.11e-15!83;UBERON:0007285!1.11e-15!83;UBERON:0000073!1.30e-14!94;UBERON:0001016!1.30e-14!94;UBERON:0003914!8.03e-14!118;UBERON:0004290!1.13e-13!70;UBERON:0005743!1.81e-13!86;UBERON:0000033!1.85e-13!123;UBERON:0000922!1.93e-13!612;UBERON:0000486!3.66e-13!82;UBERON:0001134!5.07e-13!61;UBERON:0002036!5.07e-13!61;UBERON:0003082!5.07e-13!61;UBERON:0000923!6.94e-13!604;UBERON:0005291!6.94e-13!604;UBERON:0006598!6.94e-13!604;UBERON:0002532!6.94e-13!604;UBERON:0002050!7.34e-13!605;UBERON:0005423!7.34e-13!605;UBERON:0003075!9.35e-13!86;UBERON:0007284!9.35e-13!86;UBERON:0002385!2.49e-12!63;UBERON:0001015!2.49e-12!63;UBERON:0000383!2.49e-12!63;UBERON:0002100!3.74e-12!216;UBERON:0000153!5.25e-12!129;UBERON:0007811!5.25e-12!129;UBERON:0001017!1.52e-11!82;UBERON:0001981!3.36e-11!60;UBERON:0007500!3.36e-11!60;UBERON:0004537!3.36e-11!60;UBERON:0006965!3.36e-11!60;UBERON:0002346!3.49e-11!90;UBERON:0004872!4.16e-11!84;UBERON:0000055!1.38e-10!69;UBERON:0001637!1.90e-10!42;UBERON:0003509!1.90e-10!42;UBERON:0004572!1.90e-10!42;UBERON:0002049!2.09e-10!79;UBERON:0007798!2.09e-10!79;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0003056!2.47e-10!61;UBERON:0000490!2.75e-10!138;UBERON:0000064!4.73e-10!219;UBERON:0001049!6.53e-10!57;UBERON:0005068!6.53e-10!57;UBERON:0006241!6.53e-10!57;UBERON:0007135!6.53e-10!57;UBERON:0003104!7.27e-10!238;UBERON:0009142!7.27e-10!238;UBERON:0004573!2.94e-09!33;UBERON:0004571!2.94e-09!33;UBERON:0003102!5.54e-08!95;UBERON:0002097!6.39e-08!40;UBERON:0003103!6.86e-08!69;UBERON:0002616!6.94e-08!59;UBERON:0002199!1.91e-07!45;UBERON:0002416!1.91e-07!45;UBERON:0002780!2.78e-07!41;UBERON:0001890!2.78e-07!41;UBERON:0006240!2.78e-07!41;UBERON:0003080!6.12e-07!42;UBERON:0000062!6.29e-07!511;UBERON:0005085!8.07e-07!29 | |ontology_enrichment_uberon=UBERON:0000483!2.25e-35!309;UBERON:0000119!9.70e-35!312;UBERON:0000475!1.26e-34!365;UBERON:0000025!1.30e-21!194;UBERON:0004121!1.44e-20!169;UBERON:0000481!2.36e-20!347;UBERON:0004111!3.99e-20!241;UBERON:0000924!4.31e-19!173;UBERON:0006601!4.31e-19!173;UBERON:0000468!1.33e-18!659;UBERON:0000467!7.70e-18!625;UBERON:0000480!1.30e-17!626;UBERON:0000477!1.38e-16!286;UBERON:0005256!2.31e-16!143;UBERON:0000914!1.11e-15!83;UBERON:0002329!1.11e-15!83;UBERON:0003077!1.11e-15!83;UBERON:0003059!1.11e-15!83;UBERON:0007282!1.11e-15!83;UBERON:0009618!1.11e-15!83;UBERON:0007285!1.11e-15!83;UBERON:0000073!1.30e-14!94;UBERON:0001016!1.30e-14!94;UBERON:0003914!8.03e-14!118;UBERON:0004290!1.13e-13!70;UBERON:0005743!1.81e-13!86;UBERON:0000033!1.85e-13!123;UBERON:0000922!1.93e-13!612;UBERON:0000486!3.66e-13!82;UBERON:0001134!5.07e-13!61;UBERON:0002036!5.07e-13!61;UBERON:0003082!5.07e-13!61;UBERON:0000923!6.94e-13!604;UBERON:0005291!6.94e-13!604;UBERON:0006598!6.94e-13!604;UBERON:0002532!6.94e-13!604;UBERON:0002050!7.34e-13!605;UBERON:0005423!7.34e-13!605;UBERON:0003075!9.35e-13!86;UBERON:0007284!9.35e-13!86;UBERON:0002385!2.49e-12!63;UBERON:0001015!2.49e-12!63;UBERON:0000383!2.49e-12!63;UBERON:0002100!3.74e-12!216;UBERON:0000153!5.25e-12!129;UBERON:0007811!5.25e-12!129;UBERON:0001017!1.52e-11!82;UBERON:0001981!3.36e-11!60;UBERON:0007500!3.36e-11!60;UBERON:0004537!3.36e-11!60;UBERON:0006965!3.36e-11!60;UBERON:0002346!3.49e-11!90;UBERON:0004872!4.16e-11!84;UBERON:0000055!1.38e-10!69;UBERON:0001637!1.90e-10!42;UBERON:0003509!1.90e-10!42;UBERON:0004572!1.90e-10!42;UBERON:0002049!2.09e-10!79;UBERON:0007798!2.09e-10!79;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0003056!2.47e-10!61;UBERON:0000490!2.75e-10!138;UBERON:0000064!4.73e-10!219;UBERON:0001049!6.53e-10!57;UBERON:0005068!6.53e-10!57;UBERON:0006241!6.53e-10!57;UBERON:0007135!6.53e-10!57;UBERON:0003104!7.27e-10!238;UBERON:0009142!7.27e-10!238;UBERON:0004573!2.94e-09!33;UBERON:0004571!2.94e-09!33;UBERON:0003102!5.54e-08!95;UBERON:0002097!6.39e-08!40;UBERON:0003103!6.86e-08!69;UBERON:0002616!6.94e-08!59;UBERON:0002199!1.91e-07!45;UBERON:0002416!1.91e-07!45;UBERON:0002780!2.78e-07!41;UBERON:0001890!2.78e-07!41;UBERON:0006240!2.78e-07!41;UBERON:0003080!6.12e-07!42;UBERON:0000062!6.29e-07!511;UBERON:0005085!8.07e-07!29 | ||
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| ||
|short_description=p2@PCBP4 | |short_description=p2@PCBP4 | ||
}} | }} |
Latest revision as of 22:03, 18 September 2015
Short description: | p2@PCBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCBP4_5end |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | 0bp_to_ENST00000294192, ENST00000355852, ENST00000395013, ENST00000428823, ENST00000461544, ENST00000461554, ENST00000471308, ENST00000471358, ENST00000483411, NM_020418, uc003dch.1, uc003dci.1, uc003dcj.1, uc003dck.1_5end |
EntrezGene: | PCBP4 |
HGNC: | 8652 |
UniProt: | E7EST1P57723B3KM64C9K0A2F8WC71C9IZV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.64e-19 | 250 |
mesodermal cell | 3.48e-12 | 121 |
muscle precursor cell | 5.57e-12 | 58 |
myoblast | 5.57e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.57e-12 | 58 |
muscle cell | 1.51e-11 | 55 |
fibroblast | 3.57e-11 | 76 |
electrically responsive cell | 3.70e-11 | 61 |
electrically active cell | 3.70e-11 | 61 |
smooth muscle cell | 2.23e-10 | 43 |
smooth muscle myoblast | 2.23e-10 | 43 |
ectodermal cell | 2.09e-09 | 72 |
vascular associated smooth muscle cell | 2.09e-08 | 32 |
neurectodermal cell | 1.74e-07 | 59 |
migratory neural crest cell | 6.20e-07 | 41 |