FFCP PHASE1:Hg19::chr14:106586621..106586626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5581 | |HGNC=5581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000390602_5end | |association_with_transcript=40bp_to_ENST00000390602_5end | ||
|cluster_id=chr14:106586621..106586626,- | |||
|description=CAGE_peak_3_at_IGHV3-13_5end | |description=CAGE_peak_3_at_IGHV3-13_5end | ||
|id=chr14:106586621..106586626,- | |id=chr14:106586621..106586626,- | ||
|ontology_enrichment_celltype=CL:0000236!1.18e-49!14;CL:0000945!7.63e-29!24;CL:0000826!7.63e-29!24;CL:0000542!1.23e-16!53;CL:0000051!1.23e-16!53;CL:0000946!5.56e-16!1;CL:0000786!5.56e-16!1;CL:0000980!5.56e-16!1;CL:0000838!4.40e-13!52;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2;CL:0002087!6.21e-07!119 | |ontology_enrichment_celltype=CL:0000236!1.18e-49!14;CL:0000945!7.63e-29!24;CL:0000826!7.63e-29!24;CL:0000542!1.23e-16!53;CL:0000051!1.23e-16!53;CL:0000946!5.56e-16!1;CL:0000786!5.56e-16!1;CL:0000980!5.56e-16!1;CL:0000838!4.40e-13!52;CL:0000785!1.20e-08!2;CL:0000955!1.20e-08!2;CL:0000818!1.20e-08!2;CL:0000954!1.20e-08!2;CL:0000816!1.20e-08!2;CL:0002087!6.21e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.55e-98;1!CL:0000786;1.55e-98;1!CL:0000945;1.03e-17;24!CL:0000236;5.49e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.37e-99,1;CL:0000786,9.37e-99,1;CL:0000980,9.37e-99,1;CL:0000785,2.74e-50,2;CL:0000955,2.74e-50,2;CL:0000818,2.74e-50,2;CL:0000954,2.74e-50,2;CL:0000816,2.74e-50,2;CL:0000817,4.27e-34,3;CL:0000236,2.55e-29,14;CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;3.52e-50;2 | |||
|ontology_enrichment_disease=DOID:12603!2.06e-15!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.69e-19!3;UBERON:0004854!1.69e-19!3;UBERON:0009034!1.69e-19!3;UBERON:0002095!1.69e-19!3;UBERON:0004782!1.69e-19!3;UBERON:0003281!1.69e-19!3;UBERON:0009664!1.69e-19!3;UBERON:0002296!1.69e-19!3;UBERON:0005602!1.69e-19!3;UBERON:0001179!1.69e-19!3;UBERON:0006293!1.69e-19!3;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0004177!6.56e-09!7;UBERON:0000945!6.62e-08!8;UBERON:0010039!6.62e-08!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@IGHV3-13 | |short_description=p3@IGHV3-13 | ||
}} | }} |
Latest revision as of 22:08, 18 September 2015
Short description: | p3@IGHV3-13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGHV3-13_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000390602_5end |
EntrezGene: | NA |
HGNC: | 5581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.37e-99 | 1 |
plasma cell | 9.37e-99 | 1 |
plasmablast | 9.37e-99 | 1 |
mature B cell | 2.74e-50 | 2 |
pre-B-II cell | 2.74e-50 | 2 |
transitional stage B cell | 2.74e-50 | 2 |
small pre-B-II cell | 2.74e-50 | 2 |
immature B cell | 2.74e-50 | 2 |
precursor B cell | 4.27e-34 | 3 |
B cell | 2.55e-29 | 14 |
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |