FFCP PHASE1:Hg19::chr10:69834449..69834514,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24521 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=99bp_to_ENST00000505760_5end | |||
|cluster_id=chr10:69834449..69834514,- | |||
|coexpression_cluster_id=C2068 | |||
|description=CAGE_peak_4_at_HERC4_5end | |||
|id=chr10:69834449..69834514,- | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-10!180;CL:0000548!1.76e-10!679;CL:0000004!1.76e-10!679;CL:0000255!1.76e-10!679;CL:0002620!6.29e-10!23;CL:0000012!7.48e-10!682;CL:0000057!1.49e-09!75;CL:0000066!8.31e-08!254;CL:0002321!6.09e-07!248;CL:0000220!6.37e-07!246;CL:0000077!8.64e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.89e-12;23!CL:0000077;4.15e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.38e-12,23;CL:0000057,1.68e-08,76;CL:0000066,3.01e-08,253;CL:0000077,3.78e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.36e-07!143;DOID:305!9.14e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:17;3.86e-07;5!DOID:450;3.86e-07;5!DOID:66;3.86e-07;5!DOID:423;3.86e-07;5!DOID:0080000;3.86e-07;5!DOID:11722;3.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.78e-07,106;DOID:17,3.84e-07,5;DOID:450,3.84e-07,5;DOID:66,3.84e-07,5;DOID:423,3.84e-07,5;DOID:0080000,3.84e-07,5;DOID:11722,3.84e-07,5;DOID:0050687,8.08e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.46e-11!95;UBERON:0002097!1.52e-09!40;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0004573!5.69e-07!33;UBERON:0004571!5.69e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.11e-10;9!UBERON:0001557;5.11e-10;9!UBERON:0002097;1.22e-08;41!UBERON:0002199;6.72e-07;46!UBERON:0002416;6.72e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.30e-13,99;UBERON:0002097,1.19e-10,41;UBERON:0001737,4.29e-10,9;UBERON:0002199,1.19e-08,46;UBERON:0002416,1.19e-08,46;UBERON:0004573,2.67e-07,33;UBERON:0004571,2.67e-07,33 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,3.00219895059391,0.446961094427288,0.872338524100369,0,0,0,0,0,1.31064823278103,0.527533956456907,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0,0.684372125364421,0.251085279189606,0.305653622991805,0.164201178899891,0.393553906568396,0,0.383829398097213,0,1.83884244895785,0.30120591877825,0.739508020333575,0,0.284338464974843,0,0,0.802177789880567,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0,0.521482918420201,0.434377689410233,0,0.368277635987565,0,1.05627643155971,0.850417199860174,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,23.8549840573814,2.00535164254356,9.27017721349272,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0.39752481473341,1.72046919021225,0.347140501607594,0.56530794192401,0,0.275118041940067,1.04497483268405,0.775250277507987,0,0.33472061276467,0.402829317109147,1.52054421143703,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,1.31780417436063,0,0,1.49091585508596,0.886413581652058,12.3140538156293,1.72101972449288,1.77334191099179,1.68203280042692,0,0.49333509683432,0.622422070799533,0.269421344139376,0,0,0,0.234321431833797,0.936480230490962,0,2.54062756938062,0.23486899728753,0.323745888736263,0.842704840213491,1.42907919878425,0.491337269247072,0.516628905878827,1.18800285728205,0.494533858557114,2.73048408581408,5.03032699271367,0.841680569770331,0.500474079487857,4.71008996323111,3.07284334616587,2.75839016219118,1.80285670687916,0.340296549480063,23.8588215466186,3.41691822109708,9.11307174986116,33.6102027614531,12.0571459208974,9.01741890159702,4.83903826462134,17.5527385530917,2.14361411354637,19.4374006167968,2.02509777013059,2.90962902273861,23.0756235135799,20.1504196455281,10.0040749463188,1.73934767846967,1.63647672354501,2.58124135850103,0.365921118388786,0.265059536642971,0.929551542956147,0.829288440122964,0.252320850875628,0,1.56449532329816,0,1.38134921352481,1.39310378409594,0,4.49565840151407,6.91197229320217,4.33819853790268,5.18381671842252,6.31850387867978,7.82993043066619,3.64044532032444,4.51309369788296,3.8474715694639,0,0,0,0,0,0,0.590789906681404,0,1.10689594688802,0.514703430895577,3.07300799144152,0,1.60846355858609,0.370353780634118,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0.936017060556951,0.297262324577456,2.81201501960331,2.01578553838631,1.55952606966625,6.17953806649653,4.35950907770943,2.30029607499127,0,0.176096868026452,0.414656231081544,0.144119953416961,0.25248486685276,0.444485260045183,0,0,0,0.308482478109971,0.901029173531752,0.571652865261156,0.336393253036082,0,0.22001485746285,3.87815147273333,0,0,3.19125739901845,9.36066932202295,1.54324424557285,1.41849132023278,1.3321108950805,0.142977993658148,0,0.823240336780769,0.65147236858747,0.355391948742546,0.791951872933429,4.22015127883421,7.84380112740265,1.3996218765488,0,0,0,0.479249710983165,0,1.42636905040718,8.68687840005475,6.78071864416265,2.32779252211864,0.112085143993527,0.591092280605782,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,2.49565033836969,6.24501460790066,3.78485796081443,2.34282829985426,0,0,0,2.65690239414175,1.84369168541703,5.21301686808497,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0.496215615637554,0.306923946576125,0.280660094433074,0.256278298511402,1.02341449813341,0.482561763430822,0,0.308419387605311,0.355123450626254,1.88892458831761,0.519254429183621,1.62694529843943,1.32945394550784,2.20557117333613,0.920809889358963,3.21480454860899,3.64182336013434,1.70461739447251,0,0.308061348417659,0,0,0.211103257785751,0,0.850468526382578,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0.824328093181778,0,0,1.14853107599234,0.650060246036521,1.6068392984416,0.193341436584244,0.154048617114644,0,0.413509717453592,0,0.290033387828457,0.426133137080504,0.0890320356467374,1.15699440752685,0.192190067365106,1.53135254993501,0.30347334256665,2.78907329578371,10.0739950985805,2.7881490806424,0,3.72614221221915,3.47973196830029,0.55597265731176,1.28812398067792,0.372158369359667,0,0.38126038784765,1.02359116524534,0,1.27281299170375,1.56989728039846,0.539617372749944,0.823611089208164,1.06031162111118,1.01091240786658,3.1702064234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| |||
|short_description=p4@HERC4 | |||
}} |
Latest revision as of 22:25, 18 September 2015
Short description: | p4@HERC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HERC4_5end |
Coexpression cluster: | C2068_Fibroblast_Chondrocyte_leiomyoma_spindle_mesenchymal_basal_mesothelioma |
Association with transcript: | 99bp_to_ENST00000505760_5end |
EntrezGene: | HERC4 |
HGNC: | 24521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.38e-12 | 23 |
fibroblast | 1.68e-08 | 76 |
epithelial cell | 3.01e-08 | 253 |
mesothelial cell | 3.78e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.30e-13 | 99 |
skin of body | 1.19e-10 | 41 |
larynx | 4.29e-10 | 9 |
integument | 1.19e-08 | 46 |
integumental system | 1.19e-08 | 46 |
systemic artery | 2.67e-07 | 33 |
systemic arterial system | 2.67e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.78e-07 | 106 |
musculoskeletal system disease | 3.84e-07 | 5 |
myotonic disease | 3.84e-07 | 5 |
muscle tissue disease | 3.84e-07 | 5 |
myopathy | 3.84e-07 | 5 |
muscular disease | 3.84e-07 | 5 |
myotonic dystrophy | 3.84e-07 | 5 |
cell type cancer | 8.08e-07 | 143 |